LOCUS BC062303 1631 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stearoyl-CoA desaturase (delta-9-desaturase), mRNA (cDNA clone MGC:71288 IMAGE:6586153), complete cds. ACCESSION BC062303 VERSION BC062303.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1631) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1631) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: o Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 53759150. FEATURES Location/Qualifiers source 1..1631 /db_xref="H-InvDB:HIT000260305" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71288 IMAGE:6586153" /tissue_type="Breast, adenocarcinoma" /clone_lib="NIH_MGC_107" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1631 /gene="SCD" /gene_synonym="FADS5" /gene_synonym="PRO0998" /gene_synonym="SCD1" /db_xref="GeneID:6319" /db_xref="HGNC:HGNC:10571" /db_xref="MIM:604031" CDS 377..1456 /gene="SCD" /gene_synonym="FADS5" /gene_synonym="PRO0998" /gene_synonym="SCD1" /codon_start=1 /product="stearoyl-CoA desaturase (delta-9-desaturase)" /protein_id="AAH62303.1" /db_xref="GeneID:6319" /db_xref="HGNC:HGNC:10571" /db_xref="MIM:604031" /translation="MPAHLLQDDISSSYTTTTTITAPPSRVLQNGGDKLETMPLYLED DIRPDIKDDIYDPTYKDKEGPSPKVEYVWRNIILMSLLHLGALYGITLIPTCKFYTWL WGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAH HKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYY KPGLLLMCFILPTLVPWYFWGETFQNSVFVATFLRYAVVLNATWLVNSAAHLFGYRPY DKNISPRENILVSLGAVGEGFHNYHHSFPYDYSASEYRWHINFTTFFIDCMAALGLAY DRKKVSKAAILARIKRTGDGNYKSG" BASE COUNT 379 a 477 c 391 g 384 t ORIGIN 1 gtcggtgtcg gcagcatccc cggcgccctg ctgcggtcgc cgcgagcctc ggcctctgtc 61 tcctccccct cccgccctta cctccacgcg ggaccgcccg cgccagtcaa ctcctcgcac 121 tttgcccctg cttggcagcg gataaaaggg ggctgaggaa ataccggaca cggtcacccg 181 ttgccagctc tagcctttaa attcccggct cggggacctc cacgcaccgc ggctagcgcc 241 gacaaccagc tagcgtgcaa ggcgccgcgg ctcagcgcgt accggcgggc ttcgaaaccg 301 cagtcctccg gcgaccccga actccgctcc ggagcctcag ccccctggaa agtgatcccg 361 gcatcggaga gccaagatgc cggcccactt gctgcaggac gatatctcta gctcctatac 421 caccaccacc accattacag cgcctccctc cagggtcctg cagaatggag gagataagtt 481 ggagacgatg cccctctact tggaagacga cattcgccct gatataaaag atgatatata 541 tgaccccacc tacaaggata aggaaggccc aagccccaag gttgaatatg tctggagaaa 601 catcatcctt atgtctctgc tacacttggg agccctgtat gggatcactt tgattcctac 661 ctgcaagttc tacacctggc tttggggggt attctactat tttgtcagtg ccctgggcat 721 aacagcagga gctcatcgtc tgtggagcca ccgctcttac aaagctcggc tgcccctacg 781 gctctttctg atcattgcca acacaatggc attccagaat gatgtctatg aatgggctcg 841 tgaccaccgt gcccaccaca agttttcaga aacacatgct gatcctcata attcccgacg 901 tggctttttc ttctctcacg tgggttggct gcttgtgcgc aaacacccag ctgtcaaaga 961 gaaggggagt acgctagact tgtctgacct agaagctgag aaactggtga tgttccagag 1021 gaggtactac aaacctggct tgctgctgat gtgcttcatc ctgcccacgc ttgtgccctg 1081 gtatttctgg ggtgaaactt ttcaaaacag tgtgttcgtt gccactttct tgcgatatgc 1141 tgtggtgctt aatgccacct ggctggtgaa cagtgctgcc cacctcttcg gatatcgtcc 1201 ttatgacaag aacattagcc cccgggagaa tatcctggtt tcacttggag ctgtgggtga 1261 gggcttccac aactaccacc actcctttcc ctatgactac tctgccagtg agtaccgctg 1321 gcacatcaac ttcaccacat tcttcattga ttgcatggcc gccctcggtc tggcctatga 1381 ccggaagaaa gtctccaagg ccgccatctt ggccaggatt aaaagaaccg gagatggaaa 1441 ctacaagagt ggctgagttt ggggtccctc aggttccttt ttcaaaaacc agccaggcag 1501 aggttttaat gtctgtttat taactactga ataatgctac caggatgcta aagatgatga 1561 tgttaaccca ttccagtaca gtattctttt aaaattcaaa agtattgaaa gccaaaaaaa 1621 aaaaaaaaaa a //