LOCUS BC062299 906 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens sarcospan (Kras oncogene-associated gene), mRNA (cDNA
clone MGC:71179 IMAGE:6376868), complete cds.
ACCESSION BC062299
VERSION BC062299.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 906)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 906)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16933560.
FEATURES Location/Qualifiers
source 1..906
/db_xref="H-InvDB:HIT000260301"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71179 IMAGE:6376868"
/tissue_type="Eye, normal, pigmented retinal epithelium"
/clone_lib="NIH_MGC_43"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..906
/gene="SSPN"
/gene_synonym="SPN1"
/gene_synonym="SPN2"
/db_xref="GeneID:8082"
/db_xref="HGNC:HGNC:11322"
/db_xref="MIM:601599"
CDS 81..812
/gene="SSPN"
/gene_synonym="SPN1"
/gene_synonym="SPN2"
/codon_start=1
/product="sarcospan (Kras oncogene-associated gene)"
/protein_id="AAH62299.1"
/db_xref="GeneID:8082"
/db_xref="HGNC:HGNC:11322"
/db_xref="MIM:601599"
/translation="MGKNKQPRGQQRQGGPPAADAAGPDDMEPKKGTGAPKECGEEEP
RTCCGCRFPLLLALLQLALGIAVTVVGFLMASISSSLLVRDTPFWAGIIVCLVAYLGL
FMLCVSYQVDERTCIQFSMKLLYFLLSALGLTVCVLAVAFAAHHYSQLTQFTCETTLD
SCQCKLPSSEPLSRTFVYRDVTDCTSVTGTFKLFLLIQMILNLVCGLVCLLACFVMWK
HRYQVFYVGVRICSLTASEGPQQKI"
BASE COUNT 191 a 265 c 252 g 198 t
ORIGIN
1 ggccgagcca gccgtgcgcc gcgctccagg gcccagggcg ccgcacacgc acccacccac
61 ccacccagcc tcgcagcgcc atgggcaaga acaagcagcc acgcggccag cagaggcagg
121 ggggcccgcc ggccgcggac gccgctgggc ccgacgacat ggagccgaag aagggcacgg
181 gggcccccaa ggagtgcggg gaggaggagc cccggacctg ctgcggctgc cggttcccgc
241 tgctgctcgc cctgctgcag ctggccctgg gcatcgccgt gaccgtggtg ggcttcctca
301 tggcgagcat cagctcctcc ctgctagtca gggacactcc attttgggct gggatcattg
361 tctgcttagt ggcctatctt ggcttgttta tgctttgtgt ctcatatcag gttgacgaac
421 ggacatgtat tcaattttct atgaaactgt tatactttct gctgagtgcc ctgggcctga
481 cggtctgtgt gctggccgtg gcctttgccg cccaccacta ttcgcagctc acacagttta
541 cctgtgagac cacactcgac tcttgccagt gcaaactgcc ctcctcggag ccgctcagca
601 ggacctttgt ttaccgggat gtgacggact gtaccagcgt cactggcact ttcaaactgt
661 tcttactcat ccagatgatt cttaatttgg tctgcggcct tgtgtgcttg ttggcctgct
721 ttgtgatgtg gaaacatagg taccaggtct tctatgtggg tgtcaggata tgctccctca
781 cggcttccga aggcccccag caaaagatct aacattcttg ctcaaagttg cgagagaaag
841 tagcacatgg agtagctgag gttaaacaaa caaaaaaaaa ttttaaacaa aaaaaaaaaa
901 aaaaaa
//