LOCUS BC062298 1503 bp mRNA linear HUM 26-JUN-2007 DEFINITION Homo sapiens syntaxin 1B, mRNA (cDNA clone MGC:71180 IMAGE:6375788), complete cds. ACCESSION BC062298 VERSION BC062298.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1503) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1503) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: m Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 16418378. FEATURES Location/Qualifiers source 1..1503 /db_xref="H-InvDB:HIT000260300" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71180 IMAGE:6375788" /tissue_type="Eye, normal, pigmented retinal epithelium" /clone_lib="NIH_MGC_43" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1503 /gene="STX1B" /db_xref="GeneID:112755" /db_xref="HGNC:HGNC:18539" CDS 55..921 /gene="STX1B" /codon_start=1 /product="syntaxin 1B" /protein_id="AAH62298.1" /db_xref="GeneID:112755" /db_xref="HGNC:HGNC:18539" /translation="MKDRTQELRSAKDSDDEEEVVHVDRDHFMDEFFEQVEEIRGCIE KLSEDVEQVKKQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQE EGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTT NEELEDMLESGKLAIFTDDIKMDSQMTKQALNEIETRHNEIIKLETSIRELHDMFVDM AMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGV VLASSIGGTLGL" BASE COUNT 405 a 417 c 423 g 258 t ORIGIN 1 cggagcagca gcagaggcag gaggactagg aggaggagga ggagccgtcg caggatgaag 61 gatcggactc aagagctgcg gagtgcgaaa gacagtgatg atgaagagga ggtggtccac 121 gtggatcggg accacttcat ggatgagttc tttgaacagg tggaagagat ccggggctgc 181 attgagaaac tgtcggagga tgtggagcag gtgaaaaaac agcatagcgc catcctggcc 241 gcacccaacc cagatgagaa gaccaaacag gagctggagg atctcactgc agacatcaag 301 aagacggcca acaaggttcg gtccaaattg aaagcgatcg agcaaagcat tgaacaggag 361 gaggggctga accgttcctc cgcggacctg cgcatccgca agacccagca ctccacactg 421 tcccggaagt tcgtggaggt aatgaccgaa tataacgcga cccagtccaa gtaccgggac 481 cgctgcaagg accggatcca gcggcaactg gagatcactg gaaggaccac caccaacgaa 541 gaactggaag acatgctgga gagcgggaag ctggccatct tcacagatga catcaaaatg 601 gactcacaga tgacgaagca ggcgctgaat gagattgaga cgaggcacaa tgagatcatc 661 aagctggaga ccagcatccg cgagctgcac gatatgtttg tggacatggc catgctcgta 721 gagagccagg gagagatgat tgaccgcatc gagtacaacg tggaacattc tgtggactac 781 gtggagcgag ctgtgtctga caccaagaaa gcagtgaaat atcagagcaa ggcccggagg 841 aagaaaatca tgatcatcat ttgctgtgtg gtgctggggg tggtcttggc gtcgtccatt 901 ggggggacgc tgggcttgta ggcccccccc acccttctct ctcccagacc cttcccccac 961 cacatcggga gcaatacccc caccacccct ttcactccat cccctgctcc aggctcactc 1021 ccaaaacaga cccaggcagc cccacccctc ctccaccccc acggcagacc ctggtgtccc 1081 tggacctcac cgggccatgg accccccccc gtccccgcac gtagatcgca gcaggcgtga 1141 ttacacatgc acaccaacat gcatgccgcc ggcacatgct cgagacgtgt ggacacccca 1201 gcgtgcgtgt gcgtgtgatg tgtgtgatgc accagagcac cccctccacc cccaccttgg 1261 gtgtgtgtgc gtggtctgag cttccccctt caccggggct gttgtgtaga ctgcagccaa 1321 gtgtaacaca gcagtccatc acgccctctc tgtcctctgt gaacagtgtg tgtgcgtgcg 1381 tgagaccaca gatctgtgga cacaccattt gtgtacgtgg aattttgtgt ttcagtgttt 1441 gaacctaatg caacagcaac aaagccactg aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aaa //