LOCUS BC062297 849 bp mRNA linear HUM 27-JAN-2004
DEFINITION Homo sapiens fibronectin type III domain containing 5, mRNA (cDNA
clone MGC:71121 IMAGE:6338770), complete cds.
ACCESSION BC062297
VERSION BC062297.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 849)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 849)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (17-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 50 Row: m Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24371259.
FEATURES Location/Qualifiers
source 1..849
/db_xref="H-InvDB:HIT000260299"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71121 IMAGE:6338770"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_47"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..849
/gene="FNDC5"
/gene_synonym="FRCP2"
/db_xref="GeneID:252995"
CDS 216..677
/gene="FNDC5"
/gene_synonym="FRCP2"
/codon_start=1
/product="FNDC5 protein"
/protein_id="AAH62297.1"
/db_xref="GeneID:252995"
/translation="MLRFIQEVNTTTRSCALWDLEEDTEYIVHVQAISIQGQSPASEP
VLFKTPREAEKMASKNKDEVTMKEMGRNQQLRTGEVLIIVVVLFMWAGVIALFCRQYD
IIKDNEPNNNKEKTKSASETSTPEHQGGGLLRSKVRARPGPGWATLCLMLW"
misc_feature 228..362
/gene="FNDC5"
/gene_synonym="FRCP2"
/note="FN3; Region: Fibronectin type 3 domain"
/db_xref="CDD:cd00063"
BASE COUNT 215 a 221 c 260 g 153 t
ORIGIN
1 aaagagaaaa gagagagaga ggtgctctgg ctccggggct cttctcccaa acgggtcgag
61 gtcccagctg aggctctccc aggacaagtc tctcagcccc agtgaacgtc accgtcaggc
121 acctcaaggc caactctgca gtggtgagct gggatgttct ggaggatgag gttgtcatcg
181 gatttgccat ctcccagcag aagaaggatg tgcggatgct gcgcttcatc caggaggtga
241 acaccaccac ccgctcatgt gccctctggg acctggagga ggatacggag tacatagtcc
301 acgtgcaggc catctccatt cagggccaga gcccagccag cgagcctgtg ctcttcaaga
361 ccccgcgtga ggctgagaag atggcctcca agaacaaaga tgaggtaacc atgaaagaga
421 tggggaggaa ccaacagctg cggacaggcg aggtgctgat catcgtcgtg gtcctgttca
481 tgtgggcagg tgtcattgcc ctcttctgcc gccagtatga catcatcaag gacaatgaac
541 ccaataacaa caaggaaaaa accaagagtg catcagaaac cagcacacca gagcaccagg
601 gcggggggct tctccgcagc aaggtgaggg caagacctgg gcctgggtgg gccaccctgt
661 gcctcatgct ctggtaatcc ctggactgca gagggggtca gctcggggac tggcatggcg
721 acagctgggc agagccagac ttggctgctg cctgtgtgac acagggacac tgcaagttga
781 ttttggatcc tctccttttg cagggtgcca ggggccagtg gtgatttgaa gaaaaaaaaa
841 aaaaaaaaa
//