LOCUS BC061913 1193 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens basic transcription factor 3, mRNA (cDNA clone
IMAGE:4182376), with apparent retained intron.
ACCESSION BC061913
VERSION BC061913.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1193)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1193)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: b Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29126237
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1193
/db_xref="H-InvDB:HIT000260265"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4182376"
/tissue_type="Brain, glioblastoma with EGFR amplification"
/clone_lib="NCI_CGAP_Brn64"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 393 a 232 c 235 g 333 t
ORIGIN
1 ctgccatctt gcgtccccgc gtgtgtgcgc ctaatctcag gtggtccacc cgagacccct
61 tgagcaccaa ccctagtccc ccgcgcggcc ccttattcgc tccgacaaga tgaaagaaac
121 aatcatgaac caggaaaaac tcgccaaact gcaggcacaa gtgcgcattg gtgggaaagg
181 aactgctcgc agaaagaaga aggtggttca tagaacagcc acagcagatg acaaaaaact
241 tcagttctcc ttaaagaagt taggggtaaa caatatctct ggtattgaag aggcaagtat
301 caaattttgt tactttaaaa aacaagattt ggctgggaaa agttaacgtt aatgcattaa
361 atgggttgtt tttttttttt taacttaggg acttcaaagt ccctaagatg tgtttctacc
421 ataaattaat aaatatcagg gagctcatta agtctgaatg ctattagaat acatattcca
481 ttccaggcaa aatttcacct gtgcttcaca gtgaaatact agttagccag acttagttta
541 ataaaacatt tgtttttaaa gagactggtc agcattgcta atttaaattt ttcttttctt
601 aataggtgaa tatgtttaca aaccaaggaa cagtgatcca ctttaacaac cctaaagttc
661 aggcatctct ggcagcgaac actttcacca ttacaggcca tgctgagaca aagcagctga
721 cagaaatgct acccagcatc ttaaaccagc ttggtgcgga tagtctgact agtttaagga
781 gactggccga agctctgccc aaacaatctg tggatggaaa agcaccactt gctactggag
841 aggatgatga tgatgaagtt ccagatcttg tggagaattt tgatgaggct tccaagaatg
901 aggcaaactg aattgagtca acttctgaag ataaaacctg aagaagttac tgggagctgc
961 tattttatat tatgactgct ttttaagaaa tttttgttta tggatctgat aaaatctaga
1021 tctctaatat ttttaagccc aagccccttg gacactgcag ctcttttcag tttttgctta
1081 tacacaattc attctttgca gctaattaag ccgaagaagc ctgggaatca agtttgaaac
1141 aaagattaat aaagttcttt gcctagtaaa aaaaaaaaaa aaaaaaaaaa aaa
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