LOCUS BC061912 639 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 56, mRNA (cDNA clone
MGC:70730 IMAGE:4444565), complete cds.
ACCESSION BC061912
VERSION BC061912.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 639)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 639)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: j Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706664.
FEATURES Location/Qualifiers
source 1..639
/db_xref="H-InvDB:HIT000260264"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70730 IMAGE:4444565"
/tissue_type="Liver, adenocarcinoma"
/clone_lib="NIH_MGC_90"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..639
/gene="C19orf56"
/gene_synonym="PTD008"
/db_xref="GeneID:51398"
/db_xref="HGNC:HGNC:30203"
CDS 18..338
/gene="C19orf56"
/gene_synonym="PTD008"
/codon_start=1
/product="chromosome 19 open reading frame 56"
/protein_id="AAH61912.1"
/db_xref="GeneID:51398"
/db_xref="HGNC:HGNC:30203"
/translation="MSTNNMSDPRRPNKVLRYKPPPSECNPALDDPTPDYMNLLGMIF
SMCGLMLKLKWCAWVAVYCSFISFANSRSSEDTKQMMSSFMLSISAVVMSYLQNPQPM
TPPW"
BASE COUNT 133 a 189 c 157 g 160 t
ORIGIN
1 ctggccttcg actcgctatg tccactaaca atatgtcgga cccacggagg ccgaacaaag
61 tgctgaggta caagcccccg ccgagcgaat gtaacccggc cttggacgac ccgacgccgg
121 actacatgaa cctgctgggc atgatcttca gcatgtgcgg cctcatgctt aagctgaagt
181 ggtgtgcttg ggtcgctgtc tactgctcct tcatcagctt tgccaactct cggagctcgg
241 aggacacgaa gcaaatgatg agtagcttca tgctgtccat ctctgccgtg gtgatgtcct
301 atctgcagaa tcctcagccc atgacgcccc catggtgata ccagcctaga agggtcacat
361 tttggaccct gtctatccac taggcctggg ctttggctgc taaacctgct gccttcagct
421 gccatcctgg acttccctga atgaggccgt ctcggtgccc ccagctggat agagggaacc
481 tggccctttc ctagggaaca ccctaggctt acccctcctg cctcccttcc cctgcctgct
541 gctgggggag atgctgtcca tgtttctagg ggtattcatt tgctttctcg ttgaaacctg
601 ttgttaataa agtttttcac tctgaaaaaa aaaaaaaaa
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