LOCUS BC061584 622 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens ataxia telangiectasia mutated, mRNA (cDNA clone
IMAGE:6194499), complete cds.
ACCESSION BC061584
VERSION BC061584.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 622)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 622)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336202
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..622
/db_xref="H-InvDB:HIT000260206"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6194499"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..622
/gene="ATM"
/gene_synonym="AT1"
/gene_synonym="ATE"
/gene_synonym="TEL1"
/gene_synonym="TELO1"
/db_xref="GeneID:472"
/db_xref="HGNC:HGNC:795"
/db_xref="MIM:607585"
CDS 189..527
/gene="ATM"
/gene_synonym="AT1"
/gene_synonym="ATE"
/gene_synonym="TEL1"
/gene_synonym="TELO1"
/codon_start=1
/product="ATM protein"
/protein_id="AAH61584.1"
/db_xref="GeneID:472"
/db_xref="HGNC:HGNC:795"
/db_xref="MIM:607585"
/translation="MSLVLNDLLICCRQLEHDRATERKKEVEKFKRLIRDPETIKHLD
RHSDSKQGKYLNWDAVFRFLQKYIQKETECLRIAKPNVSASTQASRQKKMQEISSLVK
YFIKCANRSK"
BASE COUNT 250 a 95 c 123 g 154 t
ORIGIN
1 acttcagcct cgcggttaag agcttgggct ctggaatcat acggctggaa ttggaattct
61 gtcagtcgtg tggccgctct ctactgtctt gtgaagataa gtgagataat cttgacctgt
121 ggtgagcact cgtgagcgtt agctgctgta tttaccagac agtgatgtgt gttctgaaat
181 tgtgaaccat gagtctagta cttaatgatc tgcttatctg ctgccgtcaa ctagaacatg
241 atagagctac agaacgaaag aaagaagttg agaaatttaa gcgcctgatt cgagatcctg
301 aaacaattaa acatctagat cggcattcag attccaaaca aggaaaatat ttgaattggg
361 atgctgtttt tagattttta cagaaatata ttcagaaaga aacagaatgt ctgagaatag
421 caaaaccaaa tgtatcagcc tcaacacaag cctccaggca gaaaaagatg caggaaatca
481 gtagtttggt caaatacttc atcaaatgtg caaacagaag taagtgatgt tataaattat
541 aaataaatgg cttaacagat aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
601 aaaaaaaaaa aaaaaaaaaa aa
//