LOCUS BC061516 1264 bp mRNA linear HUM 24-NOV-2003 DEFINITION Homo sapiens chromodomain protein, Y-like, mRNA (cDNA clone IMAGE:6503066), partial cds. ACCESSION BC061516 VERSION BC061516.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1264) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1264) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (04-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 141 Row: j Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 25777620. FEATURES Location/Qualifiers source 1..1264 /db_xref="H-InvDB:HIT000260194" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6503066" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1264 /gene="CDYL" /gene_synonym="CDYL1" /gene_synonym="DKFZP586C1622" /db_xref="GeneID:9425" /db_xref="MIM:603778" CDS <1..1043 /gene="CDYL" /gene_synonym="CDYL1" /gene_synonym="DKFZP586C1622" /codon_start=3 /product="CDYL protein" /protein_id="AAH61516.1" /db_xref="GeneID:9425" /db_xref="MIM:603778" /translation="RMGSRPRIHPLVPQVPGPVTAAMATGLAVNGKGTSPFMDALTAN GTTNIQTSVTGVTASKRKFIDDRRDQPFDKRLRFSVRQTESAYRYRDIVVRKQDGFTH ILLSTKSSENNSLNPEVMREVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRL TDDRKRESTKMAEAIRNFVNTFIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAW FQTPYTTFGQSPDGCSTVMFPKIMGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGT FTQEVMVRIKELASCNPVVLEESKALVRCNMKMELEQANERECEVLKKIWGSAQGMDS MLKYLQRKIDEF" misc_feature 336..818 /gene="CDYL" /gene_synonym="CDYL1" /gene_synonym="DKFZP586C1622" /note="ECH; Region: Enoyl-CoA hydratase/isomerase family. This family contains a diverse set of enzymes including: Enoyl-CoA hydratase. Napthoate synthase. Carnitate racemase. 3-hydoxybutyryl-CoA dehydratase. Dodecanoyl-CoA delta-isomerase" /db_xref="CDD:pfam00378" BASE COUNT 356 a 287 c 335 g 286 t ORIGIN 1 ccaggatggg gagcaggccc aggatacacc cactagtgcc tcaggtgccc ggccctgtga 61 ctgcagccat ggccacaggc ttagctgtta acgggaaagg tacatctccg ttcatggatg 121 cattaacagc caatgggaca accaacatac agacatctgt tacaggagtg actgccagca 181 aaaggaaatt tattgacgac agaagagacc agccttttga caagcgattg cgtttcagcg 241 tgaggcaaac agaaagtgcc tacagataca gagatattgt ggtcaggaag caggatggct 301 tcacccacat cttgttatcc acaaagtcct cagagaataa ctcactaaat ccagaggtaa 361 tgagagaagt ccagagtgct ctgagcacgg ccgctgccga tgacagcaag ctggtactgc 421 tcagcgccgt tggcagcgtc ttctgttgtg gacttgactt tatttatttt atacgacgtc 481 tgacagatga caggaaaaga gaaagcacta aaatggcaga agctatcaga aacttcgtga 541 atactttcat tcaatttaag aagcccatta ttgtagcagt caatggccca gccattggtc 601 taggagcatc tatattgcct ctttgcgatg tggtttgggc taatgaaaag gcttggtttc 661 aaacacccta taccaccttc ggacagagtc cagatggctg ttctaccgtt atgtttccca 721 agataatggg aggagcatct gcaaacgaga tgctgctcag tggacggaag ctgacagcgc 781 aggaggcgtg tggcaagggc ctggtctccc aggtgttttg gcccgggacg ttcactcagg 841 aagtgatggt tcgcattaag gagcttgcct cgtgcaatcc agttgtgctt gaggaatcca 901 aagccctcgt gcgctgcaac atgaagatgg agctggagca ggccaacgag agggagtgtg 961 aggtgctgaa gaaaatctgg ggctcggccc aggggatgga ctccatgtta aagtacttgc 1021 agaggaagat cgatgagttc tgagtgtcgg gctgcccact ggtgacaccg ggatcgggct 1081 gagcaggaga acatcaccgg ctccagttcc cctgatccat tctcacagcc tgaaacaagc 1141 tcacccgtag cttacgcttg gaagcaggac tgggaacatc cacgctattt attatcgagg 1201 agttttaaag tactgtaact ttaaaataaa taactacaaa gcttctttaa aaaaaaaaaa 1261 aaaa //