LOCUS BC060866 4510 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens KN motif and ankyrin repeat domains 4, mRNA (cDNA
clone MGC:71814 IMAGE:30344114), complete cds.
ACCESSION BC060866
VERSION BC060866.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4510)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4510)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44917612.
FEATURES Location/Qualifiers
source 1..4510
/db_xref="H-InvDB:HIT000260168"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71814 IMAGE:30344114"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4510
/gene="KANK4"
/gene_synonym="dJ1078M7.1"
/gene_synonym="RP5-1155K23.5"
/db_xref="GeneID:163782"
/db_xref="HGNC:HGNC:27263"
CDS 378..3365
/gene="KANK4"
/gene_synonym="dJ1078M7.1"
/gene_synonym="RP5-1155K23.5"
/codon_start=1
/product="KN motif and ankyrin repeat domains 4"
/protein_id="AAH60866.1"
/db_xref="GeneID:163782"
/db_xref="HGNC:HGNC:27263"
/translation="MEKTDAKDQSSQGDEEKDPPKSHPYSVETPYGFHLDLDFLKYVD
DIEKGNTIKRIPIHRRAKQAKFSTLPRNFSLPDSGARPPAAPPLQNWSPVVPREASLG
TQEQNQSPPLGNAPQASTSRSEVSYHRKALLAEATRQLEAAEPEDAELTFGSGRPQLL
RASSMPATLLHSRASEEPGLSLGPPAPPALPPLQGEGSVCDGTFEPAEGLAGFHSSSP
RASTRIPELVQEGAEPPEGVVKVPNHLPLPGPPFSFQNVLVVLEDKEDEHNAREAEVL
FTPGSPTPSPPPLPSPIPENELLLEEIELNISEIPPPPPVEVDMRSIGIRVTEESLGL
ARVDPGSISSLKQQVSALEGELSGRTEELAQVRTALQQQEEEIKAREQRIRELEFTVA
QLEGQFHQENAKDTQGQTDVMVNTDPVHGLLTRESCDKGIEVNLLGSMESESWGHRGE
ENGLLWGPDGHKQGNQSPAERVLLPQLSLPQGPEQVLTSSVHSFLSTELRIEEAGTEQ
EGGPQGGTRGAGGFLWGSDRKTPPAGREETSSNLPGKEHPGRPPSSPTDATIGQYVKK
IQELLQEQWNCLEHGYPELASAIKQPASKLSSIQSQLLSSLNLLLSAYSAQAHPPKEP
PASSSSPPVEISPSTSLKSIMKKKDYGFRAGGNGTKKNLQFVGVNGGYETTSSEETSG
EDSTPEDLSDSEAEKKCDGPDHKHVKDAHLTCEAGQGIPEGTCHAAQESGPGEEVPHS
KAERYKPSEEFLNACRALSQHLPETGTTTDQLLRQSLNTISQEWFRVSSRKSSSPAVV
ASYLHEVQPHSPHFLKLLVNLADRNGNTALHYSVSHSNFSIAKLLLETGVCNVDHQNK
AGYTAVMITPLASAETNEDMAVVWKLLREGNVNIQATQGGQTALMLGVSHDREDMVQA
LLSCQADVNLQDHDGSSALMLACHHGNVDLVRLLLAHPACDSSLTDKAGRTALSIALK
SPTHMEIAGLLRAHAEQGRSLGL"
BASE COUNT 1133 a 1254 c 1243 g 880 t
ORIGIN
1 gggcgctgtt ggcagctggc gacgcggggc gaagccgcgg ctggcggcgc ctggccagtc
61 ccgcatccgc cgcggtgggt gtgcccgcag gggtgcgccg gggccagggc cgagaccgtc
121 ggccagaggg cgcctggagg gtgtgcgcgc cgcggacgac cagggtgcgc cagccccggg
181 gtgcgcgcct gggacgcgga cagtgcaccc ggaggttgcg tgcgctccga agccggggtg
241 tgcgcctagc tgccccggcc ccgtgcaccg cgggccgcct cgcgcaggac ttccgcagct
301 cgccaagaac cttcaacaag ttttacagac tcattggatg aagagtgcct gagacactga
361 gggtcagcgc tccaaagatg gagaagacag atgccaaaga ccagtcctct cagggggatg
421 aagagaaaga ccctccgaag agccaccctt attctgtgga gaccccatat ggctttcatt
481 tagacctgga cttcctcaag tatgtggatg acatcgagaa gggaaacact atcaaaagaa
541 ttcctatcca cagaagggcc aagcaggcca aatttagcac tctgccccga aacttcagcc
601 ttcctgacag tggggctcgc ccccctgcag ccccgcccct ccaaaactgg tctcccgtgg
661 tgccaaggga ggcatcactt gggacacagg agcaaaacca gtcgccgccg cttggtaatg
721 ccccccaggc ctcaacaagc aggagtgagg tgagctacca caggaaggct ctgttggcag
781 aggccaccag acagttggaa gctgctgagc cagaggatgc cgagctcact tttgggagtg
841 gacggcccca gctcttgaga gcatccagca tgcctgccac gctgctgcac agcagggctt
901 ctgaggagcc aggcctgagc ctggggcccc ctgcccctcc tgccctccct ccccttcagg
961 gtgaaggcag tgtctgtgat ggcacctttg aacctgcaga aggattggca ggtttccaca
1021 gctccagccc acgagcatca actcggattc cagagctggt ccaggaggga gctgagcctc
1081 cagagggcgt ggtgaaggtt ccaaatcacc tccctctccc aggccctcct ttctcattcc
1141 agaatgtgct tgtagttcta gaggacaagg aagatgaaca caatgccaga gaagcagagg
1201 tgttgttcac ccctggctcc cctacgccaa gcccgccacc tctgccatca cccatccctg
1261 agaatgagct cctcctggaa gaaatcgagc tcaacatcag cgagattcca cccccgccac
1321 ctgtagaggt ggacatgaga agcattggca tcagggtaac tgaggaaagc ctgggccttg
1381 ccagggtgga tccaggcagc atctccagcc tgaaacagca ggtctcggcc ctggagggag
1441 agttgtctgg aagaaccgag gaactggcac aggtcagaac tgctctccag cagcaggaag
1501 aggaaatcaa agctagggag caaagaattc gagagctgga gttcactgta gcccaactgg
1561 aaggacagtt tcaccaagag aacgccaaag acactcaggg ccagacggac gtgatggtga
1621 acactgaccc tgtccatgga ctcttgacca gggagtcgtg tgataagggc attgaagtca
1681 accttctagg cagcatggag tctgaaagct gggggcaccg aggagaggag aatggcctcc
1741 tatgggggcc agatggtcat aaacaaggga atcagagccc agcagaacgt gtgcttctgc
1801 cccagctgtc actgccacag ggacccgagc aggtccttac ctcctctgta catagcttcc
1861 tctccactga actcaggatt gaagaagcag gcactgaaca ggaaggaggc cctcagggag
1921 gaaccagggg agcaggaggc tttctgtggg gcagtgacag aaagactccc ccagcaggga
1981 gggaggagac cagttccaat ctcccaggga aggagcaccc gggaaggcca ccaagctcgc
2041 caacggatgc cactattggg cagtatgtga agaagatcca ggagctcctg caggagcagt
2101 ggaactgcct ggagcatggg tacccggagc tggccagcgc catcaagcag ccagcctcca
2161 agctcagcag catccagagc cagctgctga gctccctcaa cctgctgctg tcggcctact
2221 cggcccaggc tcacccaccc aaggagccgc cggcctcctc ctcctccccg ccagtggaga
2281 tctccccatc gaccagcctt aaatccataa tgaaaaagaa agactatggc ttccgtgcag
2341 gaggtaatgg gaccaaaaag aaccttcagt ttgttggggt taacggtggg tatgagacca
2401 cctcaagtga ggagaccagc ggtgaggaca gcaccccaga ggacttgtct gacagcgagg
2461 cagagaagaa gtgtgacggc ccagatcaca agcatgtcaa agatgcccat ctcacctgcg
2521 aggctgggca gggcatccct gagggcacct gccatgctgc ccaggaaagt gggcctgggg
2581 aagaagtccc ccactccaag gccgagagat ataaaccctc agaagaattt cttaatgcat
2641 gccgggcact gagccagcat ctgccagaaa ctgggaccac cacagaccag ctcttgaggc
2701 aaagcttgaa caccatcagt caagagtggt tccgcgtctc cagccggaag tcgtctagcc
2761 ctgccgtggt ggcctcctac ctccacgagg tccagcctca ctccccacac ttcctgaagc
2821 tgcttgtcaa cttggccgat cgcaacggga acacggccct tcactacagc gtgtcccact
2881 ccaacttctc catcgcgaag ctgctgctgg agacaggcgt ctgcaatgtg gaccatcaga
2941 acaaagctgg ctacactgcc gtaatgatca ctcccttggc ttccgcagag accaatgaag
3001 acatggctgt tgtctggaag ctcttaagag aaggaaatgt gaacattcaa gctactcagg
3061 gaggccagac tgcgctgatg ctgggagtca gccacgacag ggaggacatg gttcaagcgc
3121 tgcttagctg ccaggcagat gtcaatctgc aggaccacga tggatcctcg gccctcatgc
3181 tggcctgtca ccatggcaac gtggacctgg tgcggctgct cctggcacac ccagcctgcg
3241 acagcagcct gactgacaag gctggccgca cagctttgtc catcgctctg aagtcaccca
3301 cccatatgga aattgctggg cttctgagag cccacgcgga gcagggcagg tccctggggc
3361 tgtaggggct gcagaagaac tggccgtggg gaacaaaagc cttcttctct ggactcctcc
3421 ctcgcccttg aagagggcag aggtcacagg ccagagagcc acccttctag agaagaaact
3481 atgtcaaata tgcacataca ttcctgttgt ataattctgc tcattaggat gctttgtagt
3541 ttttgcctta ggccaagcct gaaaactaca cgggcttcag agcagggttc aaggtgcaag
3601 gtgaggggta cgtcggtgtc atccaaacat ccaaaacatc ttcagccttg aattcctcat
3661 gactctaccc tctgtaacat tgtgtagcaa gcaggcaggc aggagcacat tagcacatta
3721 gaaaagcaat actttttaca tggaatttta cagtgcacta tctttctgtt ttttaagcaa
3781 gtgtatacaa atatgtccca ttgatatgca tgtctataga tgggagggga tttaagccaa
3841 ccccctggca agcattctgt aggggaccct agaagaatca ccgtgcagac tggtgaaact
3901 gaacaagcac catttgggag ctttgtttcg atggggttga cagagaaatc ttaaaatctg
3961 acagggtaga agaagcactt tggcatcaat gccatatgta cagtcttgac tatttctgag
4021 tcatctagtg gctccaattt gctccaggga aattggaatt aattaagaaa tttattatct
4081 agtaagttgc tatgtaataa agaaaaaaaa gaaattcaat ccaatgacac acaccacatg
4141 tatttgggca gagtcagatt ctctcagcta ttttgagtct gtggaagaaa caaaaaaaag
4201 cttcctcctg aggatgggtt attgtcatca agaagccacc tgcatagccg tatccattac
4261 ctcatggtaa ttcccggtgc tttcccctca tatcccctag aagcaaatat ctgttctgag
4321 gttttttggg acttctggct gcaataggag caagggaccc aggcagggca gagcaatacc
4381 ttccgaagct tccatattcc ctggggccag cacatgcaag gtttatatgg tcagtagctc
4441 acgtgaagtc atctgaatct ttcttaaatc tgctctctta aaatctctta tgccaaaaaa
4501 aaaaaaaaaa
//