LOCUS BC060861 2556 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens chromosome 3 open reading frame 39, mRNA (cDNA clone
MGC:71796 IMAGE:30335722), complete cds.
ACCESSION BC060861
VERSION BC060861.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2556)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2556)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: b Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40255248.
FEATURES Location/Qualifiers
source 1..2556
/db_xref="H-InvDB:HIT000260163"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71796 IMAGE:30335722"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2556
/gene="C3orf39"
/gene_synonym="AGO61"
/gene_synonym="FLJ14566"
/db_xref="GeneID:84892"
/db_xref="HGNC:HGNC:25902"
CDS 344..2086
/gene="C3orf39"
/gene_synonym="AGO61"
/gene_synonym="FLJ14566"
/codon_start=1
/product="chromosome 3 open reading frame 39"
/protein_id="AAH60861.1"
/db_xref="GeneID:84892"
/db_xref="HGNC:HGNC:25902"
/translation="MHLSAVFNALLVSVLAAVLWKHVRLREHAATLEEELALSRQATE
PAPALRIDYPKALQILMEGGTHMVCTGRTHTDRICRFKWLCYSNEAEEFIFFHGNTSV
MLPNLGSRRFQPALLDLSTVEDHNTQYFNFVELPAAALRFMPKPVFVPDVALIANRFN
PDNLMHVFHDDLLPLFYTLRQFPGLAHEARLFFMEGWGEGAHFDLYKLLSPKQPLLRA
QLKTLGRLLCFSHAFVGLSKITTWYQYGFVQPQGPKANILVSGNEIRQFARFMTEKLN
VSHTGVPLGEEYILVFSRTQNRLILNEAELLLALAQEFQMKTVTVSLEDHTFADVVRL
VSNASMLVSMHGAQLVTTLFLPRGATVVELFPYAVNPDHYTPYKTLAMLPGMDLQYVA
WRNMMPENTVTHPERPWDQGGITHLDRAEQARILQSREVPRHLCCRNPEWLFRIYQDT
KVDIPSLIQTIRRVVKGRPGPRKQKWTVGLYPGKVREARCQASVHGASEARLTVSWQI
PWNLKYLKVREVKYEVWLQEQGENTYVPYILALQNHTFTENIKPFTTYLVWVRCIFNK
ILLGPFADVLVCNT"
BASE COUNT 511 a 787 c 739 g 519 t
ORIGIN
1 gctccgcgcc gggctcgccc gccgggcagg cgcacggcgg gcacctgcga gcctggaggt
61 ggcggtcgct gcgaacccgg cggcgcggcc aaacctgtgc tggctgcctg ggccttctgg
121 gcctcctggg ccagaagctg gcgctggggg cggcggcggg gtgggaaagc ggcgccgccg
181 tggggcctcc tggacgcgtc ggcggaggtg gcttcgtccc gcggagtcca ggcttcaggc
241 tttcaccagt tctcaggatg cccataggga tgggtgaagc ctgcctggcc tgtggtgctt
301 cccagtggcc gtcatctcat tagggcccca cagtggcatt aggatgcacc tctcggcggt
361 gttcaacgcc ctcctggtgt cggtgctggc agcggtcctg tggaagcatg tgcggctgcg
421 tgagcatgca gccacactgg aggaggagct ggccctcagc cgacaggcca cagagccagc
481 cccagcactg aggatcgact acccgaaggc actgcagatc ctgatggagg gcggcacaca
541 catggtgtgc acgggccgca cgcacacaga ccgcatctgc cgcttcaagt ggctctgcta
601 ctccaacgag gctgaggagt tcatcttctt ccatggcaac acctctgtca tgctgcccaa
661 cctgggctcc cggcgcttcc agccagccct gctcgaccta tccaccgtgg aggaccacaa
721 cactcagtac ttcaacttcg tggagctgcc tgctgctgcc ctgcgcttca tgcccaagcc
781 ggtgttcgtg ccagacgtgg ccctcatcgc caaccgcttc aaccccgaca acctcatgca
841 cgtctttcat gacgacctgc tgccactctt ctacaccctg cggcagtttc ccggcctggc
901 ccacgaggca cggctcttct tcatggaggg ctggggcgag ggtgcacact tcgacctcta
961 caagctgctc agccccaagc agcctctcct gcgggcacag ctgaagaccc tgggccggct
1021 gctgtgcttc tcccatgctt ttgtgggcct ctccaagatc actacctggt accagtatgg
1081 ctttgtgcag ccccagggcc cgaaggccaa catcctcgtc tcaggcaatg agatccggca
1141 gtttgcacgg ttcatgacag aaaagctgaa cgtgagccac acaggagtcc ccctaggcga
1201 ggagtacatt ctggtcttta gccgaaccca gaacagactc attctgaatg aggcagagct
1261 gctgctggca ctggcccagg agttccagat gaagacagtg acagtgtccc tggaggacca
1321 cacctttgct gatgtcgtgc ggctggtcag caatgcctcc atgctggtca gcatgcatgg
1381 ggcccagctg gtcaccaccc tcttcctgcc ccgtggggca actgtggtag agctcttccc
1441 atatgctgtc aatcccgacc actacactcc ctataagacg ctggccatgc tgcctggcat
1501 ggacctccag tatgtagcct ggcggaacat gatgccagag aacacagtca cacaccctga
1561 gcggccctgg gatcaggggg gcatcaccca tctggaccgg gctgagcaag cccgtatcct
1621 gcaaagccgt gaggtcccac ggcatctctg ttgccggaac cccgagtggc tcttccgaat
1681 ctaccaggac accaaggtgg acatcccatc cctcattcaa accatacggc gcgtggtgaa
1741 gggccggcca ggaccacgga agcagaagtg gacagtcggc ctatatccag gcaaggtgcg
1801 ggaggcacgg tgccaggcgt cagtgcatgg cgcctccgag gcccgcctca ctgtctcctg
1861 gcagatccca tggaacctta aatacctgaa ggtgagggag gtgaagtacg aggtgtggct
1921 gcaggagcag ggggagaaca cctacgtgcc ttacatcctg gctctgcaga accacacctt
1981 cactgagaac atcaagccct tcaccaccta cctggtgtgg gtccgctgca tcttcaacaa
2041 gatcctcctg ggaccctttg cagatgtgct ggtgtgcaac acgtagcgag caggccacag
2101 cctggcctcg ggaaggtggc tcctgcagtt cagcgtccct gggcccatta atcccactgt
2161 ggagacttct gggaactatt tattgagcag gcctgtgcct ccacatcatc ttgttgtctc
2221 tggggtgtgg tgtcacagca ctcctctttg ccctagagat aagggacctg acttcccctt
2281 ctcccatcct gaacatttgt acccctggag aagttcctta gcagggagga ggaagaggag
2341 aggaggaagc aaagaatcac aaggaacctc tggctaggtg atcctgatgt ttcctactga
2401 gtttttctgg tatccagatt tctggaaacc gagtaatcat gtactgtttg attgggtggt
2461 tcatctgctt ccatcccagt gaaatttacc tgtagcccag tgaagggtgt gtttggaaca
2521 ttcattaaat gattctaaac aaaaaaaaaa aaaaaa
//