LOCUS BC060855 4172 bp mRNA linear HUM 19-OCT-2006 DEFINITION Homo sapiens SMEK homolog 2, suppressor of mek1 (Dictyostelium), mRNA (cDNA clone MGC:71778 IMAGE:5259789), complete cds. ACCESSION BC060855 VERSION BC060855.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4172) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4172) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: l Column: 6 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39930396. FEATURES Location/Qualifiers source 1..4172 /db_xref="H-InvDB:HIT000260157" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71778 IMAGE:5259789" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..4172 /gene="SMEK2" /gene_synonym="FLFL2" /gene_synonym="KIAA1387" /gene_synonym="PSY2" /gene_synonym="smk1" /db_xref="GeneID:57223" /db_xref="HGNC:HGNC:29267" /db_xref="MIM:610352" CDS 330..2624 /gene="SMEK2" /gene_synonym="FLFL2" /gene_synonym="KIAA1387" /gene_synonym="PSY2" /gene_synonym="smk1" /codon_start=1 /product="SMEK homolog 2, suppressor of mek1 (Dictyostelium)" /protein_id="AAH60855.1" /db_xref="GeneID:57223" /db_xref="HGNC:HGNC:29267" /db_xref="MIM:610352" /translation="MSDTRRRVKVYTLNEDRQWDDRGTGHVSSTYVEELKGMSLLVRA ESDGSLLLESKINPNTAYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQG KDPSVEVTQDLIDESEEERFEEMPETSHLIDLPTCELNKLEEIADLVTSVLSSPIRRE KLALALENEGYIKKLLQLFQACENLENTEGLHHLYEIIRGILFLNKATLFEVMFSDEC IMDVVGCLEYDPALAQPKRHREFLTKTAKFKEVIPITDSELRQKIHQTYRVQYIQDII LPTPSVFEENFLSTLTSFIFFNKVEIVSMLQEDEKFLSEVFAQLTDEATDDDKRRELV NFFKEFCAFSQTLQPQNRDAFFKTLAKLGILPALEIVMGMDDLQVRSAATDIFSYLVE FSPSMVREFVMQEAQQSDDDILLINVVIEQMICDTDPELGGAVQLMGLLRTLIDPENM LATTNKTEKSEFLNFFYNHCMHVLTAPLLTNTSEDKCEKDNIVGSNKNNTICPGALRF MRRIIGLKDEFYNRYITKGNLFEPVINALLDNGTRYNLLNSAVIELFEFIRVEDIKSL TAHIVENFYKALESIEYVQTFKGLKTKYEQEKDRQNQKLNSVPSILRSNRFRRDAKAL EEDEEMWFNEDEEEEGKAVVAPVEKPKPEDDFPDNYEKFMETKKAKESEDKENLPKRT SPGGFKFTFSHSASAANGTNSKSVVAQIPPATSNGSSSKTTNLPTSVTATKGSLVGLV DYPDDEEEDEEEESSPRKRPRLGS" BASE COUNT 1354 a 738 c 907 g 1173 t ORIGIN 1 aggcagagag agtcgggtta caagatggcg gatctgtagt agttaccgcg gcggcgggag 61 agcaagcgag ccctgggggg caaagagacg ggagagtggg tgtatgcgcg ggtgaagtga 121 gaggtaacgg ggcctccggg cggagaggcc tcagtggctc ttgtcacccc ttctcgcggc 181 tgaacctttg gagccatggt gaattcgggc ctctccgaag ccgccgccgc cgccaccgcc 241 actactgcct ttaccgtctc ctaagagtga ggagcgcgga cgaggtaagc gaggaggcgg 301 cggctagagc ggtggagaca gcagccacca tgtcggatac gcggcggcga gtgaaggtct 361 ataccctgaa cgaagaccgg caatgggacg accgaggcac cgggcacgtc tcctccactt 421 acgtggagga gctcaagggg atgtcgctgc tggttcgggc agagtccgac ggatcactac 481 tcttggaatc aaagataaat ccaaatactg catatcagaa acaacaggat acattaattg 541 tttggtcaga agcagagaac tatgatttgg ctctgagttt tcaggagaaa gctggctgtg 601 atgagatctg ggaaaaaatt tgtcaggttc aaggtaaaga cccatcagtg gaagtcacac 661 aggacctcat tgatgaatct gaagaagaac gatttgaaga aatgcctgaa actagtcatc 721 tgattgacct gcccacatgt gaactcaata aacttgaaga gattgctgac ttagttacct 781 cagtgctctc ctcacctatc cgtagggaaa agctggctct cgccttggaa aatgaaggct 841 atattaaaaa actattgcag ctgttccaag cttgcgagaa cctagaaaac actgaaggct 901 tacaccattt gtatgaaatt attagaggaa tcttattcct aaataaggca actctttttg 961 aggtaatgtt ttctgatgag tgtatcatgg atgtcgtggg atgccttgaa tatgaccctg 1021 ctttggctca gccaaaaaga catagagaat tcttgaccaa aactgcaaag ttcaaggaag 1081 ttataccaat aacagactct gaactaaggc aaaaaataca tcagacttac agggtacagt 1141 acattcagga catcattttg cccacaccat ctgtttttga agagaatttt ctttctactc 1201 ttacgtcttt tattttcttc aacaaagttg agatagtcag catgttgcag gaagatgaga 1261 agtttttgtc tgaagttttt gcacaattaa cagatgaggc tacagatgat gataaacggc 1321 gtgaattggt taattttttc aaggagtttt gtgcattttc tcagacatta caacctcaaa 1381 acagggatgc atttttcaaa acattggcaa aattgggaat tcttcctgct cttgaaattg 1441 taatgggcat ggatgatttg caagtcagat cagctgctac agatatattt tcttatctag 1501 tagaatttag tccatctatg gtccgagagt ttgtaatgca agaagctcag cagagtgatg 1561 acgatattct tcttattaat gtggtaattg aacaaatgat ctgtgatact gatcctgagc 1621 taggaggcgc tgttcagtta atgggacttc ttcgtactct aattgatcca gagaacatgc 1681 tggctacaac taataaaacc gaaaaaagtg aatttctaaa ttttttctac aaccattgta 1741 tgcatgttct cacagcacca cttttgacca atacttcaga agacaaatgt gaaaaggata 1801 atatagttgg atcaaacaaa aacaacacaa tttgtcccgg tgcccttcgc tttatgaggc 1861 ggataattgg acttaaagat gaattttata atcgttacat caccaaggga aatctttttg 1921 agccagttat aaatgcactt ctggataatg gaactcggta taatctgttg aattcagctg 1981 ttattgagtt gtttgaattt ataagagtgg aagatatcaa gtctcttact gcccatatag 2041 ttgaaaactt ttataaagca cttgaatcga ttgaatatgt tcagacattc aaaggattga 2101 agactaaata tgagcaagaa aaagacagac aaaatcagaa actgaacagt gtaccatcta 2161 tattgcgtag taacagattt cgcagagatg caaaagcctt ggaagaggat gaagaaatgt 2221 ggtttaatga agatgaagaa gaggaaggaa aagcagttgt ggcaccagtg gaaaaaccta 2281 agccagaaga tgattttcca gataattatg aaaagtttat ggagactaaa aaagcaaaag 2341 aaagtgaaga caaggaaaac cttcccaaaa ggacatctcc tggtggcttc aaatttactt 2401 tctcccactc tgccagtgct gctaatggaa caaacagtaa atctgtagtg gctcagatac 2461 caccagcaac ttctaatgga tcctcttcca aaaccacaaa cttgcctacg tcagtaacag 2521 ccaccaaggg aagtttggtt ggcttagtgg attatccaga tgatgaagag gaagatgaag 2581 aagaagaatc gtcccccagg aaaagacctc gtcttggctc ataaaatatt tattagggga 2641 ccctcaacat gtggtcttac aatgctgcaa ctgttcagtg agctgaaaat ctgaatcaga 2701 aagctttctc aattgaactt ataaaatata caaggagtag caaaagacag tatatcagct 2761 aagagagttt agttctaata aaaatcaggc ttcccaggaa cttgattgct tgctagtaat 2821 taaggggttt gccttttagg ctgtcaaaac aaacattagt aaccagaacc tgggagacag 2881 cttctcagca aggaaaagtc acaggtttgg ggacggttta ggggagggga aaaggttgat 2941 ataataatgc agggttgctc ctcggggtgt cgatctagaa acaattttac agaacttcag 3001 ttgtaaactc aataacatta cttgtataat ggtgctggcc atgttgttgt tttaatcagt 3061 tgcctctttt taaaagaaat ttttatggaa aacacattca actatcatta aaaaaatgaa 3121 gttaagctgt tgggaccatt tctttaagat ttaacaaaag ttcagccttt taggtagttg 3181 aagggaagta caccccgtat tcagcacatg ttgagttttc tacaccagga attttcaata 3241 tgtatattga tgaaaacaag ctcaattcaa actggacagt tttaagataa tgttaaaatc 3301 agcactttta gagacaacga aggccaagaa tcagtacagt agtattccaa aatgattttc 3361 tctagaaatt tgaaagtaga tcgaacagaa tgttgtcaac cgcctaccag tacaatcttt 3421 tgtggaagat actttgaaat cactttctac tttgttagta aagttctgtc tttccagagc 3481 tgcaagtttt aaagtgttac ttatacagac caaccaagaa tagtgctgaa ttaagtggca 3541 tttagtatct agaagccatt ttgatccaag aagctactta agtgtcaaag tcagcatgca 3601 gcacatgtag cttttctgta aacaagggtg tgatatgaaa gctgcttttt taagaagagt 3661 aaaagcacat tccatatacg taagtgaatt ttaaaaataa attgaggcaa acagttaagt 3721 tttattttta gagcaacaag ttaactgtaa atattttaat gttagtttgc tcatctatga 3781 tctgagatca tgccgaagtg agaaaaatct ccccaaaata caatttaatg cattgggaaa 3841 aaaaaacttt aacagtaatt ccagccacaa tccttagatc acccttgtaa tgtgttacgg 3901 gtccattttt cctggaatcg tttaatctaa agcagtttcc cctgttttgg agattttgta 3961 gttaatttta attttggcta ttgtttggaa aagatgagct gtctgtgtag atatgaagta 4021 tagttttttc cataaaacag atgtttattt tgtattaaaa aataccactg tacttgtttt 4081 acaccatttg tatacatgtg gtgatattaa tgctaaactg taaaattcag gaattaaaat 4141 gtgaccctgt aattccaaaa aaaaaaaaaa aa //