LOCUS BC060829 3767 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens protein phosphatase 4, regulatory subunit 1, mRNA
(cDNA clone MGC:71698 IMAGE:30342594), complete cds.
ACCESSION BC060829
VERSION BC060829.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3767)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3767)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: f Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4826933.
FEATURES Location/Qualifiers
source 1..3767
/db_xref="H-InvDB:HIT000260131"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71698 IMAGE:30342594"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3767
/gene="PPP4R1"
/gene_synonym="PP4(Rmeg)"
/gene_synonym="PP4R1"
/db_xref="GeneID:9989"
/db_xref="HGNC:HGNC:9320"
/db_xref="MIM:604908"
CDS 76..2877
/gene="PPP4R1"
/gene_synonym="PP4(Rmeg)"
/gene_synonym="PP4R1"
/codon_start=1
/product="protein phosphatase 4, regulatory subunit 1"
/protein_id="AAH60829.1"
/db_xref="GeneID:9989"
/db_xref="HGNC:HGNC:9320"
/db_xref="MIM:604908"
/translation="MADLSLLQEDLQEDADGSLDFVSQDEMLTPLGRLDKYAASENIF
NRQMVARSLLDTLREVCDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIALFCQE
NRPSIPYAFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDVETKVCPVL
IELTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFCEMCCDCRMFHVRKVCAA
NFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLS
ALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTR
DQEAPEDVQVRPEDTPSDLSVSNSSVILENTMEDHAAEASGKPLGEISVPLDSSLLCT
LSSESHQEAASNENDKKPGNYKSMLRPEVGTTSQDSALLDQELYNSFHFWRTPLPEID
LDIELEQNSGGKPSPEGPEEESEGPVPSSPNITMATRKELEEMIENLEPHIDDPDVKA
QVEVLSAALRASSLDAHEETISIEKRSDLQDELDINELPNCKINQEDSVPLISDAVEN
MDSTLHYIHSDSDLSNNSSFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEI
AKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLT
AADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWR
FRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKLHAA
TPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTL
ANDRVPNVRVLLAKTLRQTLLEKDYFLASASCHQEAVEQTIMALQMDRDSDVKYFASI
HPASTKISEDAMSTASSTY"
BASE COUNT 1046 a 811 c 896 g 1014 t
ORIGIN
1 accggctccc cggctcgcgc cgctccatgt agccccggct ccccgggcgg ccgcggagga
61 gggggcgacc acaagatggc ggacctctcg ctgcttcagg aggacctgca ggaggacgca
121 gacggatccc tggactttgt ctcacaagat gaaatgttga cgcccctggg gagattggac
181 aagtatgctg caagtgagaa catatttaac agacaaatgg tggcccggag tttgctcgat
241 accttgaggg aagtctgcga tgatgaaaga gattgtattg ctgttttgga aagaattagc
301 agattggccg atgattcaga accaactgtg agagcggagc tgatggaaca ggtgcctcac
361 atcgcactgt tttgtcaaga aaaccggcct tcaataccat atgctttttc aaaattctta
421 ctacctattg tggttagata ccttgcagat cagaataatc aggtgaggaa aacaagtcag
481 gcagctttgc tggctctgtt ggagcaggag ctcattgaac gatttgatgt ggagaccaaa
541 gtgtgccctg tcctcataga gctgacagcc ccagatagca atgatgatgt gaaaacagaa
601 gctgtggcta taatgtgcaa aatggctccc atggttggga aggatattac agagcgtctt
661 atcctcccta ggttttgtga gatgtgctgc gattgcagaa tgtttcacgt tcgaaaggtc
721 tgtgctgcca attttggaga tatttgcagt gtagttggcc agcaagctac tgaagaaatg
781 ttgctgccca gatttttcca gctttgttct gataatgtat ggggagtccg aaaggcttgt
841 gctgaatgct tcatggcggt ttcatgtgca acatgtcaag aaatccgacg gaccaaatta
901 tcagcacttt ttattaattt gatcagtgat ccttcacgtt gggttcgcca agcagctttt
961 cagtctctgg gacctttcat atctactttt gctaatccat ctagctcagg ccagtatttt
1021 aaagaagaaa gcaaaagttc agaagagatg tcagtagaaa acaaaaatag gaccagagat
1081 caagaagccc cagaggatgt acaagtcagg ccagaggata ctccttcaga tctcagtgtt
1141 agtaattcca gtgtcatact ggaaaacacg atggaagacc atgctgctga ggcatccggg
1201 aagcctctag gtgaaattag tgttccactg gacagctctt tactttgtac tttgtcctca
1261 gaatctcacc aggaagcagc tagtaatgag aatgataaaa aacctggtaa ctacaaatct
1321 atgttacgac cagaggttgg caccacttca caagattcag ctctcttaga tcaggaattg
1381 tataactcct tccatttctg gaggactcct cttcctgaaa tagatctaga catagagctt
1441 gaacagaact ctgggggaaa acccagccca gagggaccag aggaagaatc tgagggccct
1501 gtgcccagtt ctccaaacat caccatggcc accagaaagg aactggaaga aatgatagaa
1561 aatctagagc cccacattga tgatccagat gttaaagcac aagtggaagt gctgtccgct
1621 gcactacgtg cttccagcct ggatgcacat gaagagacca tcagtataga aaagagaagt
1681 gatttgcaag atgaactgga tataaatgag ctaccaaatt gtaaaataaa tcaagaagat
1741 tctgtgcctt taatcagcga tgctgttgag aatatggact ccactcttca ctatattcac
1801 agcgattcag acttgagcaa caatagcagt tttagccctg atgaggaaag gagaactaaa
1861 gtacaagatg ttgtacctca ggcgttgtta gatcagtatt tatctatgac tgacccttct
1921 cgtgcacaga cggttgacac tgaaattgct aagcactgtg catatagcct ccctggtgtg
1981 gccttgacac tcggaagaca gaattggcac tgcctgagag agacgtatga gactctggcc
2041 tcagacatgc agtggaaagt tcgacgaact ctagcattct ccatccacga gcttgcagtt
2101 attcttggag atcaattgac agctgcagat ctggttccaa tttttaatgg atttttaaaa
2161 gacctcgatg aagtcaggat aggtgttctt aaacacttgc atgattttct gaagcttctt
2221 catattgaca aaagaagaga atatctttat caacttcagg agtttttggt gacagataat
2281 agtagaaatt ggcggtttcg agctgaactg gctgaacagc tgattttact tctagagtta
2341 tatagtccca gagatgttta tgactattta cgtcccattg ctctgaatct gtgtgcagac
2401 aaagtttctt ctgttcgttg gatttcctac aagttggtca gcgagatggt gaagaagctg
2461 cacgcggcaa caccaccaac gttcggagtg gacctcatca atgagcttgt ggagaacttt
2521 ggcagatgtc ccaagtggtc tggtcggcaa gcctttgtct ttgtctgcca gactgtcatt
2581 gaggatgact gccttcccat ggaccagttt gctgtgcatc tcatgccgca tctgctaacc
2641 ttagcaaatg acagggttcc taacgtgcga gtgctgcttg caaagacatt aagacaaact
2701 ctactagaaa aagactattt cttggcctct gccagctgcc accaggaggc tgtggagcag
2761 accatcatgg ctcttcagat ggaccgtgac agcgatgtca agtattttgc aagcatccac
2821 cctgccagta ccaaaatctc cgaagatgcc atgagcacag cgtcctcaac ctactagaag
2881 gcttgaatct cggtgtcttt cctgcttcca tgagagccga ggttcagtgg gcattcgcca
2941 cgcatgtgac ctgggatagc tttcggggga ggagagacct tcctctcctg cggacttcat
3001 tgcaggtgca agttgcctac acccaatacc agggatttca agagtcaaga gaaagtacag
3061 taaacactat tatcttatct tgactttaag gggaaataat ttctcagagg attataattg
3121 tcaccgaagc cttaaatcct tctgtcttcc tgactgaatg aaacttgaat tggcagagca
3181 ttttccttat ggaagggatg agattcccag agacctgcat tgctttctcc tggttttatt
3241 taacaatcga caaatgaaat tcttacagcc tgaaggcaga cgtgtgccca gatgtgaaag
3301 agaccttcag tatcagccct aactcttctc tcccaggaag gacttgctgg gctctgtggc
3361 cagctgtcca gcccagccct gtgtgtgaat cgtttgtgac gtgtgcaaat gggaaaggag
3421 gggtttttac atctcctaaa ggacctgatg ccaacacaag taggattgac ttaaactctt
3481 aagcgcagca tattgctgta cacatttaca gaatggttgc tgagtgtctg tgtctgattt
3541 tttcatgctg gtcatgacct gaaggaaatt tattagacgt ataatgtatg tctggtgttt
3601 ttaacttgat catgatcagc tctgaggtgc aacttcttca catactgtac atacctgtga
3661 ccactcttgg gagtgctgca gtctttaatc atgctgttta aactgttgtg gcacaagttc
3721 tcttgtccaa ataaaattta ttaataagat ctaaaaaaaa aaaaaaa
//