LOCUS BC060821 3579 bp mRNA linear HTC 28-JUL-2005
DEFINITION Homo sapiens general transcription factor IIIC, polypeptide 4,
90kDa, mRNA (cDNA clone IMAGE:4825930), with apparent retained
intron.
ACCESSION BC060821
VERSION BC060821.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3579)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3579)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 6912399
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3579
/db_xref="H-InvDB:HIT000260123"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4825930"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
BASE COUNT 896 a 892 c 980 g 811 t
ORIGIN
1 cttccgggtc cggaacggct ccagctgtac ggactcgtcc cgaggggagc cggggacggc
61 ggcaccgggc gggtagggac aagactaccg cgcgtgcccc cgcctggtgg cagcccctct
121 ctgcgtccct cgcggcctgg caaaattaca ttcggccgag agttcacgct ggggaagctc
181 tctgaatgcc tctgagaagc gagatccggc gccatctcac cgacgagcct cccctttacc
241 gccccgtgcg tttcctcagc actttaggaa ctaaagcctg tctgggtagc tccctaacag
301 gctctggagc tcaatccctg ggcagggaaa agggggtcct cggggctccc cgctcgctgt
361 cctttttctg gacaggcagt tccttggcca cctggtaggg ccgcgttgcc tggcaacggc
421 ggggtccttc ttggctcggc ggcgctcggg gcctgagggg agaaaaccgc cgcggagggc
481 gctgggggtg gcggcggcgg tccgggaggt ggtcgcgcga ctgcgtggag cgccagggcg
541 tccgacctct gcacctgaga gaagatgaac acggccgacc aggcccgggt ggggcccgcg
601 gacgacgggc ctgcgccgtc tggggaggag gagggagagg ggggcggcga ggcgggcggg
661 aaggagccag cagcggacgc ggccccgggg cccagcgctg cattccgcct catggtgact
721 cggcgggagc cggccgtgaa gctgcagtat gcggtgagcg gcctggaacc gctggcttgg
781 tccgaggacc accgcgtgtc tgtgtccacg gcccgcagca tcgctgtgct ggagctcatc
841 tgcgacgtgc acaacccggg ccaggacctg gttatccacc gcacctcggt gcccgcaccg
901 ctcaacagct gtctcctcaa agttggctca aaaacagaag ttgctgagtg caaggagaaa
961 ttcgccgcct ccaaggaccc cacggtcagt cagactttca tgttggatag ggtgttcaac
1021 cctgagggga aggctttacc accaatgaga ggattcaagt acaccagctg gtctcccatg
1081 ggttgcgatg ctaatggcag gtgcctcttg gcagcactga ccatggacaa tcgcctgacc
1141 atccaggcaa atctcaacag actgcagtgg gtccagctgg ttgacctgac tgagatctat
1201 ggagaacgtc tttatgagac cagttacagg ctctctaaaa atgaggcccc ggaaggaaat
1261 ctcggggatt ttgctgagtt tcagaggaga cacagcatgc agaccccagt cagaatggag
1321 tggtcgggca tctgtaccac ccagcaggtc aagcataaca acgaatgccg ggacgttggc
1381 agtgtgctcc tggctgtcct ctttgaaaac ggtaatatcg ccgtgtggca gtttcagctg
1441 ccgtttgtag gaaaagaatc catctcttca tgcaacacaa ttgagtcagg aatcacctct
1501 cccagtgtat tgttttggtg ggaatatgag cacaataatc gaaaaatgag tggccttatt
1561 gtggggagtg cttttggacc cataaaaatt cttcctgtca atctcaaagc agtcaaaggc
1621 tatttcactt taaggcagcc tgttatcttg tggaaagaaa tggaccagtt acctgtgcac
1681 agtatcaaat gtgtgccact ttatcatcct taccagaagt gtagttgcag cttagtagtg
1741 gctgcaagag gctcttatgt attttggtgt cttcttctga tctccaaagc agggctgaat
1801 gttcacaatt cccatgtcac aggccttcac tcactgccaa ttgtctccat gactgcagac
1861 aaacagaatg gaacagtcta tacttgctcc agtgacggaa aggtgaggca gctgattccc
1921 attttcacag atgttgcatt gaagtttgaa caccagttga ttaaactctc agatgtgttt
1981 ggctcagtga ggactcacgg gatagcagtg agcccctgcg gtgcatacct ggccatcatc
2041 accactgagg gcatgatcaa cggcctccac cctgttaaca aaaactacca ggtccaattt
2101 gttactctca aaacctttga agaggcagct gctcagctcc tggaatcttc agttcaaaac
2161 ctttttaagc aggtagattt aatagaccta gtacgctgga agattttaaa agataaacat
2221 atccctcaat ttttacaaga agctttggaa aaaaagattg aaagcagtgg agtcacctat
2281 ttttggcgtt ttaagctttt cctcctgagg attttatatc agtcaatgca gaaaacccct
2341 tcagaagcct tgtggaaacc cacccatgag gactcaaaaa tcttactagt ggattcgcct
2401 gggatgggca atgctgacga tgaacagcag gaagaaggca cttcttccaa acaggtggtg
2461 aagcaaggcc tgcaggagag gagcaaggaa ggagatgtag aggagcccac tgatgactcg
2521 ctccccacga ctggagatgc tggaggccgt gagccaatgg aagagaaact cctggaaatc
2581 caagggaaaa tcgaagctgt ggagatgcac ttgaccaggg aacacatgaa gcgagtctta
2641 ggagaagtgt atctgcacac ctggatcaca gaaaacacta gcatccccac ccgcggactc
2701 tgtaactttt taatgtctga tgaagagtat gatgacagaa ctgcacggaa ctctgaaatc
2761 cttgtttcag aagcaactaa aacaaggtgc tgattggaca tatctcaaag aagatgaaca
2821 aacagacttt ccctgagcac tgtagtttgt gtaaagagat cttgccattc acagatcgca
2881 aacaggcagt ctgttccaat ggccacattt ggctccggtg cttcttaacc taccagtcct
2941 gccagagttt gatatataga aggtgtttgc tccatgacag cattgcccgg catccagctc
3001 cagaagatcc cgactggatt aagaggttac tgcaaagccc ctgccctttc tgtgattctc
3061 ctgtcttcta aataatcagt gacgggaaga tggaagggca tgatgaactc tgccatagaa
3121 aacttcctcc agcctgaaga gaaggatgca ctggaggaag ccggaccctc acgagtggag
3181 agaagtcctt ggtgattgta aagagggccc ctggagctca tttctgaatc gcactctcca
3241 tttccagaga ctaaaggatg tcctttgaaa tggctggact cagagagttg gagtcgtttt
3301 gagatgagca ttagccccag ctttgtaacc aatgaggaac acttacttat ttttaagtat
3361 cttgacagaa gcaatttgaa cacagtgtcc cgtcatttct agaaacagaa tggtctcttc
3421 tagagagctt ggataaggac cttgctgggt tgagttaggt tttaatcatt gctttggttt
3481 ggaactgcct tcgggctcca gaacttaaat tgcttggtcc gtggcatctg atgtaccaac
3541 agagattaaa agtgtaaagc aacaaaaaaa aaaaaaaaa
//