LOCUS BC060811 1924 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens scavenger receptor class A, member 3, mRNA (cDNA clone
MGC:71653 IMAGE:30335021), complete cds.
ACCESSION BC060811
VERSION BC060811.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1924)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1924)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: b Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33598921.
FEATURES Location/Qualifiers
source 1..1924
/db_xref="H-InvDB:HIT000260113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71653 IMAGE:30335021"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1924
/gene="SCARA3"
/gene_synonym="APC7"
/gene_synonym="CSR"
/gene_synonym="CSR1"
/gene_synonym="MSLR1"
/gene_synonym="MSRL1"
/db_xref="GeneID:51435"
/db_xref="HGNC:HGNC:19000"
/db_xref="MIM:602728"
CDS 334..1734
/gene="SCARA3"
/gene_synonym="APC7"
/gene_synonym="CSR"
/gene_synonym="CSR1"
/gene_synonym="MSLR1"
/gene_synonym="MSRL1"
/codon_start=1
/product="scavenger receptor class A, member 3"
/protein_id="AAH60811.1"
/db_xref="GeneID:51435"
/db_xref="HGNC:HGNC:19000"
/db_xref="MIM:602728"
/translation="MKVRSAGGDGDALCVTEEDLAGDDEDMPTFPCTQKGRPGPRCSR
CQKNLSLHTSVRILYLFLALLLVAVAVLASLVFRKVDSLSEDISLTQSIYDKKLVLMQ
KNLQGLDPKALNNCSFCHEAGQLGPEIRKLQEELEGIQKLLLAQEVQLDQTLQAQEVL
STTSRQISQEMGSCSFSIHQVNQSLGLFLAQVRGWQATTAGLDLSLKDLTQECYDVKA
AVHQINFTVGQTSEWIHGIQRKTDEETLTLQKIVTDWQNYTRLFSGLRTTSTKTGEAV
KNIQATLGASSQRISQNSESMHDLVLQVMGLQLQLDNISSFLDDHEENMHDLQYHTHY
AQNRTVERFESLEGRMASHEIEIGTIFTNINATDNHVHSMLKYLDDVRLSCTLGFHTH
AEELYYLNKSVSIMLGTTDLLRERFSLLSARLDLNVRNLSMIVEEMKAVDTQHGEILR
NVTILRGHTLFSHNRI"
BASE COUNT 448 a 586 c 541 g 349 t
ORIGIN
1 gggaggaagg gtgcgcgggg cgaggggcgg cggcagacct cgcggggccc cagcgggaag
61 cgcgggcggc ggcgggatgc gcgctctggg cggcggggcg cggcgctagg cgcccggcgg
121 ggcttcccca ggctgcgacc ccgcgggacc ctccactcct cccgccgcct ccgcagcccg
181 cgcgccggag catgagtccc ggccggagcc ccacggccgc gggcggcgcc taggacggcg
241 atccgcgccc tggaggatcc gccggccgcc cggctccact acagctccag ccgcctgcag
301 cggggccctc ctgaggcccc agaggaagag accatgaaag tgaggtcggc cggcggcgat
361 ggagatgcct tgtgcgttac agaagaggac ctggcgggtg acgacgagga catgccgacc
421 ttcccatgca cccagaaggg ccggccaggg ccccgctgca gccgctgcca gaagaaccta
481 tctttgcaca catcggtgcg gattctttac ctcttcctgg ccctgctcct ggtggccgtg
541 gctgtgttgg cctctctggt tttcagaaaa gtggactctc tctccgaaga catctccttg
601 acccagtcta tttatgacaa gaagcttgtg ttaatgcaga aaaatctcca gggcctggat
661 ccgaaagccc tgaacaactg ctctttctgc catgaagctg ggcagctggg gccagagatc
721 cgaaaactgc aggaggagct ggagggaatt cagaagctgc ttctggccca ggaggtgcag
781 ctggaccaga ccttacaggc ccaggaggtg ctctccacca ccagcagaca aatctcccag
841 gagatgggca gttgctcctt ctccatccac caggttaacc agtctctggg gctcttcctg
901 gcccaggtga gaggctggca ggccaccaca gctggcctgg acctctctct gaaggacctc
961 acccaggagt gctacgatgt caaggctgca gtgcaccaga tcaacttcac cgtggggcag
1021 acttccgagt ggatccacgg gatccagcgg aagacagacg aggagaccct gaccctccag
1081 aagattgtca ccgactggca gaactacaca cggctcttca gcggcctgcg caccacctcc
1141 accaagactg gagaggcggt caagaacatc caggccaccc tgggggcctc ctcacagcgc
1201 atcagccaga actcagagag catgcacgac ctggtactcc aggtcatggg cttgcagctg
1261 cagctggata acatctcgtc cttcctggat gaccacgaag agaacatgca tgatcttcag
1321 taccataccc actacgccca gaaccgcact gtggagaggt ttgagtctct ggaaggacgc
1381 atggcttctc acgagattga aattggcacc atcttcacca acatcaatgc caccgacaac
1441 cacgtgcaca gcatgctcaa gtacctggat gacgtgcggc tctcctgcac gctgggcttc
1501 cacacccatg ccgaggagct ctactacctg aacaagtctg tctccatcat gctgggcacc
1561 acagacctgc tccgggagcg cttcagcctg ctcagtgccc ggctggacct caacgtccgg
1621 aacctctcca tgatcgtgga ggagatgaag gcagtggaca cacagcatgg agaaatcctt
1681 cgcaatgtca ccatcctacg aggtcacact ttgttttcac ataatcggat atgatatgaa
1741 gccagccata aagcccagga tgaccaagaa tataatttga aaatgaattt gtttactatc
1801 cttaatggta agcatcacct taagcacata ttatgccttg agacactagc caattgtggt
1861 acatgaaaat aatttataaa taaataaatt tacctatatt aggaagacga aaaaaaaaaa
1921 aaaa
//