LOCUS BC060796 3044 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 62, mRNA (cDNA clone
MGC:71605 IMAGE:5284906), complete cds.
ACCESSION BC060796
VERSION BC060796.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3044)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3044)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: n Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42475943.
FEATURES Location/Qualifiers
source 1..3044
/db_xref="H-InvDB:HIT000260098"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71605 IMAGE:5284906"
/tissue_type="Brain, hippocampus"
/clone_lib="NIH_MGC_95"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3044
/gene="CCDC62"
/gene_synonym="aaa"
/gene_synonym="FLJ40344"
/gene_synonym="TSP-NY"
/db_xref="GeneID:84660"
/db_xref="HGNC:HGNC:30723"
CDS 146..2200
/gene="CCDC62"
/gene_synonym="aaa"
/gene_synonym="FLJ40344"
/gene_synonym="TSP-NY"
/codon_start=1
/product="coiled-coil domain containing 62"
/protein_id="AAH60796.1"
/db_xref="GeneID:84660"
/db_xref="HGNC:HGNC:30723"
/translation="MNPPAAFLAGRQNIGSEVEISTIEKQRKELQLLIGELKDRDKEL
NDMVAVHQQQLLSWEEDRQKVLTLEERCSKLEGELHKRTEIIRSLTKKVKALESNQME
CQTALQKTQLQLQEMAQKATHSSLLSEDLEARNETLSNTLVELSAQVGQLQAREQALT
TMIKLKDKDIIEAVNHIADCSGKFKMLEHALRDAKMAETCIVKEKQDYKQKLKALKIE
VNKLKEDLNEKTTENNEQREEIIRLKQEKSCLHDELLFTVEREKRKDELLNIAKSKQE
RTNSELHNLRQIYVKQQSDLQFLNFNVENSQELIQMYDSKMEESKALDSSRDMCLSDL
ENNHPKVDIKREKNQKSLFKDQKFEAMLVQQNRSDKSSCDECKEKKQQIDTVFGEKSV
IKLSSIFTKDLVEKHNLPWSLGGKTQIEPENKITLCKIHTKSPKCHGTGVQNEGKQPS
ETPTLSDEKQWHDVSVYLGLTNCPSSKHPEKLDVECQDQMERSEISCCQKNEACLGES
GMCDSKCCHPSNFIIEAPGHMSDVEWMSIFKPSKMQRIVRLKSGCTCSESICGTQHDS
PASELIAIQDSHSLGSSKSALREDETESSSNKKNSPTSLLIYKDAPAFNEKASIVLPS
QDDFSPTSKLQRLLAESRQMVTDLELSTLLPISHENLTGSATNKSEVPEESAQKNTFV
SY"
BASE COUNT 1045 a 613 c 660 g 726 t
ORIGIN
1 ggttggagta cggggcgggg gtcggccgag ggcgcggggc cccggggctc cgggctcgcc
61 cccgccgctc ggggcaggcg cgccgatggc gtttctgagg tgacgccgcc cacaccgggc
121 ttctccgggg gcggaggaaa cacctatgaa ccctccggca gccttccttg ccgggcgcca
181 gaacatcggg tcagaagttg agatttccac tatcgagaaa caacggaagg agctgcagtt
241 gctcattgga gaattaaaag atcgagataa agagctcaat gacatggttg cagtgcacca
301 gcaacagctt ctttcatggg aagaggatcg gcagaaagtg ttgacactgg aagaacgttg
361 cagcaaatta gaaggtgaac tacataaaag aactgaaata atcaggtcac tcacgaagaa
421 ggtaaaagct cttgaatcca atcaaatgga atgccaaaca gctctccaaa agacccaact
481 acagcttcag gaaatggctc aaaaggcaac gcattcttct cttctctctg aagaccttga
541 ggctagaaac gaaactctca gcaacacgtt agtggaactt tctgcccagg taggacagct
601 acaagctcga gaacaagctc ttacgacaat gataaagcta aaggacaaag atattattga
661 ggcagttaat cacattgcag attgttcggg taaatttaaa atgctagagc atgccctacg
721 tgatgccaag atggcggaga cttgtattgt gaaagaaaag caagattata agcagaaatt
781 gaaggcactt aagattgaag tcaacaaact aaaagaggac ctcaatgaaa agacgacaga
841 aaataatgag caacgagaag agatcattcg cctcaagcaa gagaaaagtt gcctgcacga
901 tgaattgctt tttactgtag agagagaaaa gaggaaagat gaattgctta atattgcgaa
961 gtcaaagcaa gaacgcacaa attcagaact gcacaatctg agacagattt atgtaaaaca
1021 acagagtgat ctgcagtttc ttaatttcaa tgtggaaaat tctcaggaat taatacagat
1081 gtatgactca aagatggagg aatcaaaggc tctggactcc agcagagaca tgtgtttatc
1141 agaccttgaa aataaccacc caaaagtcga tattaagagg gaaaaaaatc agaagtcact
1201 gtttaaggac cagaaatttg aagccatgtt ggttcagcaa aataggtcag acaagagctc
1261 ttgcgatgaa tgcaaagaga agaaacaaca gatcgatact gtgtttgggg agaaaagtgt
1321 aattaagctg tcatccatat tcaccaaaga cttagtagag aaacacaacc tcccttggtc
1381 tctgggagga aaaacccaga ttgaacccga aaacaaaatt acattgtgca agatccacac
1441 aaaatcacca aaatgtcatg gcactggggt tcagaacgaa ggaaaacaac cctcagaaac
1501 acccacttta tctgatgaga agcagtggca tgatgtcagt gtttacctgg gcctgaccaa
1561 ctgtccaagt tcaaaacatc cagaaaagct ggatgtagaa tgtcaagatc agatggaaag
1621 gtccgaaatc tcatgctgcc agaaaaatga agcctgtctg ggcgaaagtg gcatgtgtga
1681 ctccaagtgc tgccacccga gtaacttcat aattgaagcc ccaggccaca tgtctgacgt
1741 ggagtggatg agtattttca agccttccaa aatgcagaga attgtccgcc tcaaatctgg
1801 gtgcacctgt tcagaaagca tctgtggcac acaacatgac tccccggcaa gtgagctaat
1861 tgccatccaa gattcccact ctttgggttc ttcaaaatct gccttgagag aagatgagac
1921 ggagtcctct tccaataaaa agaactcacc tacgagtttg ttaatctaca aagatgcacc
1981 agcattcaat gaaaaggctt caattgtgtt accctcccag gatgatttct cgcccacgag
2041 caagctccag cgtttgctgg cggaatctcg tcagatggtg acggacctgg agctgagcac
2101 actgctgccc atcagccatg agaatctcac tggcagtgcc acaaataagt cagaggtccc
2161 agaagagtca gctcaaaaaa atacctttgt cagttattga aggaaacaaa aggcaacttc
2221 agtattcatc gtgatcacga atttctcatc tatgtggaag gcagaaagca gacaccaata
2281 ctgaatgaat acttaaccgt aaaactgaaa gaggattcta gttcttcata aacggcactt
2341 aattccagct gggagcagaa ctagaaagtt aatttttaaa catctacact tcattttcaa
2401 gttaaccatt tttgtgctga agaaatattt tcatgtgtaa gaaagtagac cttattgtac
2461 atatagaaag ttggaattat gctaagaatg aaaaagactt ctctgtaaag atacggacta
2521 cagttaaatg ctagagaagc tctttaaaaa tgtgaatgtc aaatagagaa agaacccctg
2581 catagaaagt gctgttttaa ctatctgatt tttaaaaaat ctgtgcatac atttaaattc
2641 taaacaatag cttatcagag tcagctcaaa atatatgaga aacagtattc tctcatggtt
2701 ttagcttttg actttgctgt gtaaatagac ataaggtgct ttgatataaa atataaaatg
2761 taactggaaa atagctcgag gtccttctgt cccaagctga gcagagcccc atctttctgg
2821 gtctatatta gtcccaccta ctgacacaaa caaaagcttg ctggaagatc gagttttaga
2881 cgcattttta aaaatcttaa agactaaaac acttccattt taacttgtaa agtaatttaa
2941 ttttttaaag attatactat atgcctctgt gtcttctcta aaagaataga tcaacttcag
3001 tccataaaag atatttttaa tattaaagaa aaaaaaaaaa aaaa
//