LOCUS BC060787 2724 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase), mRNA (cDNA clone MGC:71574 IMAGE:30343493), complete cds. ACCESSION BC060787 VERSION BC060787.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2724) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2724) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: f Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 46255044. FEATURES Location/Qualifiers source 1..2724 /db_xref="H-InvDB:HIT000260089" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71574 IMAGE:30343493" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2724 /gene="HLCS" /gene_synonym="HCS" /db_xref="GeneID:3141" /db_xref="HGNC:HGNC:4976" /db_xref="MIM:609018" CDS 439..2619 /gene="HLCS" /gene_synonym="HCS" /codon_start=1 /product="holocarboxylase synthetase (biotin-(proprionyl-Coenzyme A-carboxylase (ATP-hydrolysing)) ligase)" /protein_id="AAH60787.1" /db_xref="GeneID:3141" /db_xref="HGNC:HGNC:4976" /db_xref="MIM:609018" /translation="MEDRLHMDNGLVPQKIVSVHLQDSTLKEVKDQVSNKQAQILEPK PEPSLEIKPEQDGMEHVGRDDPKALGEEPKQRRGSASGSEPAGDSDRGGGPVEHYHLH LSSCHECLELENSTIESVKFASAENIPDLPYDYSSSLESVADETSPEREGRRVNLTGK APNILLYVGSDSQEALGRFHEVRSVLADCVDIDSYILYHLLEDSALRDPWTDNCLLLV IATRESIPEDLYQKFMAYLSQGGKVLGLSSSFTFGGFQVTSKGALHKTVQNLVFSKAD QSEVKLSVLSSGCRYQEGPVRLSPGRLQGHLENEDKDRMIVHVPFGTRGGEAVLCQVH LELPPSSNIVQTPEDFNLLKSSNFRRYEVLREILTTLGLSCDMKQVPALTPLYLLSAA EEIRDPLMQWLGKHVDSEGEIKSGQLSLRFVSSYVSEVEITPSCIPVVTNMEAFSSEH FNLEIYRQNLQTKQLGKVILFAEVTPTTMRLLDGLMFQTPQEMGLIVIAARQTEGKGR GGNVWLSPVGCALSTLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQDINLRV KWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLITEYNKQH KAELKPLRADYLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYWVHSGQQVHLGSAEGP KVSIVGLDDSGFLQVHQEGGEVVTVHPDGNSFDMLRNLILPKRR" BASE COUNT 682 a 672 c 718 g 652 t ORIGIN 1 gcgggtgacc acccggcgca ggagcggccg cgtctcggcc tcagaatcca ttgaagactt 61 gaacaagtgg gccctatttc ttgtgtctcc ttttatactt gaagcagaac acatagcatt 121 tgtgacggag agcatttggg tacaaagtga gaatttacag agatcatcct cttcagaaac 181 agttcggttt ttgcccacta gggatgatgt ggtttctcat gaggttactt gctctaaagg 241 actttatatt ttggaaccat aagagcaccc ttgtggccca ggcactttat ggatgatccc 301 ttttagtgct cccagtaacc ttccaagatt gtcaagtggt cagactgttg tttgccatta 361 gcttgcagac ctggggatcc ttatcggcta attgctgaag caagtgtgga caacttcagc 421 aagctggggg tggcgttcat ggaagataga ctccacatgg ataatggact ggtaccccaa 481 aagattgtgt cggtgcactt gcaggactcc actctgaagg aagttaagga tcaggtctca 541 aacaagcaag cccagatcct agagccgaag cctgaacctt ctcttgagat taagcctgag 601 caggacggta tggagcatgt tggcagagat gacccaaagg ctcttggtga agaacccaaa 661 caaaggagag gcagtgcctc tgggagtgag cctgctgggg acagtgacag gggagggggc 721 cccgttgagc attatcacct ccatctgtct agttgccacg agtgtctgga acttgagaac 781 agcaccattg agtcagtcaa gtttgcgtct gccgagaaca ttccagacct tccctacgat 841 tatagcagca gtttggagag tgttgctgat gagacctccc ccgaaagaga agggaggaga 901 gtcaacctca cgggaaaggc acccaacatc ctcctctatg tgggctccga ctcccaggaa 961 gccctcggcc ggttccacga ggtccggtct gtgctggccg actgtgtgga cattgacagt 1021 tatattctct accacctgct ggaggacagt gctctcagag acccgtggac ggacaactgt 1081 ctgctgttgg tcattgctac cagggagtcc attcccgaag acctgtacca gaagttcatg 1141 gcctatcttt ctcagggagg gaaggtgttg ggcctgtctt catccttcac ctttggtggc 1201 tttcaggtga caagcaaggg tgcactgcac aagacagtcc agaacttggt tttctccaag 1261 gctgaccaga gtgaggtgaa gctcagcgtc ttgagcagtg gctgcaggta ccaggaaggc 1321 cccgtccggc tcagccccgg caggctccag ggccacctgg agaatgagga caaggacagg 1381 atgattgtgc atgtgccttt tggaactcgc gggggagaag ctgttctttg ccaggtgcac 1441 ttagaactac ctcccagctc caacatagtg caaactccag aagattttaa cttgctcaag 1501 tcaagcaatt ttagaagata cgaagtcctt agagagattc tgacaaccct tggcctcagc 1561 tgtgacatga aacaagttcc tgccttaact cctctttact tgctgtcagc tgcggaggaa 1621 atcagggatc ctcttatgca gtggcttggg aaacatgtgg actccgaggg agaaataaaa 1681 tccggccagc tctctcttag atttgtttca tcctacgtgt ctgaagtaga aataacccca 1741 tcttgtatac ctgtggtgac caacatggag gccttctcat cagaacattt caacttagag 1801 atctatcgcc aaaatctgca gaccaagcag ttggggaaag taattttgtt tgccgaagtg 1861 acccccacaa cgatgcgtct cctggatggg ctgatgtttc agacaccgca ggaaatgggc 1921 ttaatagtga tcgcggcccg gcagaccgag ggcaaaggac ggggagggaa tgtgtggctg 1981 agccctgtgg gatgtgctct ttctactctg ctcatctcca ttccactgag atcccagctg 2041 ggacagagga tcccgtttgt ccagcatctg atgtccgtgg ctgtcgtgga agcagtgagg 2101 tccattcccg agtatcagga tatcaactta cgagtgaagt ggcccaacga tatttattac 2161 agtgacctca tgaagatcgg cggagttctg gttaactcaa cactcatggg agaaacattt 2221 tatatactta ttggctgtgg atttaatgtg actaacagta accctaccat ctgcatcaac 2281 gacctcatca cagaatacaa taaacaacac aaggcagaac tgaagccctt aagagccgat 2341 tatctcatcg ccagagtcgt gactgtgctg gagaaactga tcaaagagtt tcaggacaaa 2401 gggcccaaca gcgtccttcc cctttattac cgatactggg tccacagtgg tcagcaagtc 2461 catctgggca gcgcagaggg accaaaggtg tccatcgttg gcctggacga ttctggcttc 2521 ctccaggttc accaggaggg cggcgaggtt gtgactgtgc acccggacgg caactccttc 2581 gacatgctga gaaacctcat cctccccaaa cggcggtaat gccgggcgtc cccgagacgc 2641 ggctgcctgt ccgtgcccat gcatctggaa atctaattta gagttgtagg tgaattttct 2701 tttcctccaa aaaaaaaaaa aaaa //