LOCUS BC060320 566 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens transducin (beta)-like 1 X-linked receptor 1, mRNA
(cDNA clone IMAGE:4358996), partial cds.
ACCESSION BC060320
VERSION BC060320.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 566)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 566)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (20-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: f Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 51477719.
FEATURES Location/Qualifiers
source 1..566
/db_xref="H-InvDB:HIT000260044"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4358996"
/tissue_type="Adrenal cortex, carcinoma"
/clone_lib="NIH_MGC_84"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>566
/gene="TBL1XR1"
/gene_synonym="C21"
/gene_synonym="DC42"
/gene_synonym="IRA1"
/gene_synonym="TBLR1"
/db_xref="GeneID:79718"
/db_xref="HGNC:HGNC:29529"
/db_xref="MIM:608628"
CDS 181..>566
/gene="TBL1XR1"
/gene_synonym="C21"
/gene_synonym="DC42"
/gene_synonym="IRA1"
/gene_synonym="TBLR1"
/codon_start=1
/product="TBL1XR1 protein"
/protein_id="AAH60320.1"
/db_xref="GeneID:79718"
/db_xref="HGNC:HGNC:29529"
/db_xref="MIM:608628"
/translation="MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALV
PPAALISIIQKGLQYVEAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDK
LAQQQAAAAAAAAAAASQQGSAKKKK"
BASE COUNT 152 a 118 c 155 g 141 t
ORIGIN
1 aattgcctct caccccccgg aggggttatt ttgggggtgg ttggaggcgg tggcggcggc
61 ggcggcgagg aggggaattt ccttgtgcct ccattcccgg gaggggggag cggcgttgga
121 ggccaccgtt tccagggtta tatcctgtgt tgtgacctca tggtttaagt gggaataaag
181 atgagtataa gcagtgatga ggtcaacttc ttggtatata gatacttgca agagtcagga
241 ttttctcatt cagcatttac ctttggtata gaaagccata tcagtcagtc caatataaat
301 ggtgccctcg tcccacccgc tgcattgatt tctatcatcc agaaaggtct acagtatgta
361 gaagcagaag ttagtattaa tgaggatggt accttgtttg atggtcgacc aatagagtct
421 ctgtccctga tagatgccgt aatgcctgat gtagtacaaa caagacaaca agcttataga
481 gataagcttg cacagcaaca ggcagcagct gctgcagctg ccgcagctgc agccagccaa
541 caaggatctg caaaaaaaaa aaaaaa
//