LOCUS BC059391 3516 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens sodium channel, nonvoltage-gated 1, gamma, mRNA (cDNA
clone MGC:71711 IMAGE:30337498), complete cds.
ACCESSION BC059391
VERSION BC059391.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3516)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3516)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: c Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42476332.
FEATURES Location/Qualifiers
source 1..3516
/db_xref="H-InvDB:HIT000259991"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71711 IMAGE:30337498"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3516
/gene="SCNN1G"
/gene_synonym="ENaCg"
/gene_synonym="ENaCgamma"
/gene_synonym="PHA1"
/gene_synonym="SCNEG"
/db_xref="GeneID:6340"
/db_xref="HGNC:HGNC:10602"
/db_xref="MIM:600761"
CDS 140..2089
/gene="SCNN1G"
/gene_synonym="ENaCg"
/gene_synonym="ENaCgamma"
/gene_synonym="PHA1"
/gene_synonym="SCNEG"
/codon_start=1
/product="sodium channel, nonvoltage-gated 1, gamma"
/protein_id="AAH59391.1"
/db_xref="GeneID:6340"
/db_xref="HGNC:HGNC:10602"
/db_xref="MIM:600761"
/translation="MAPGEKIKAKIKKNLPVTGPQAPTIKELMRWYCLNTNTHGCRRI
VVSRGRLRRLLWIGFTLTAVALILWQCALLVFSFYTVSVSIKVHFRKLDFPAVTICNI
NPYKYSTVRHLLADLEQETREALKSLYGFPESRKRREAESWNSVSEGKQPRFSHRIPL
LIFDQDEKGKARDFFTGRKRKVGGSIIHKASNVMHIESKQVVGFQLCSNDTSDCATYT
FSSGINAIQEWYKLHYMNIMAQVPLEKKINMSYSAEELLVTCFFDGVSCDARNFTLFH
HPMHGNCYTFNNRENETILSTSMGGSEYGLQVILYINEEEYNPFLVSSTGAKVIIHRQ
DEYPFVEDVGTEIETAMVTSIGMHLTESFKLSEPYSQCTEDGSDVPIRNIYNAAYSLQ
ICLHSCFQTKMVEKCGCAQYSQPLPPAANYCNYQQHPNWMYCYYQLHRAFVQEELGCQ
SVCKEACSFKEWTLTTSLAQWPSVVSEKWLLPVLTWDQGRQVNKKLNKTDLAKLLIFY
KDLNQRSIMESPANSIEMLLSNFGGQLGLWMSCSVVCVIEIIEVFFIDFFSIIARRQW
QKAKEWWAWKQAPPCPEAPRSPQGQDNPALDIDDDLPTFNSALHLPPALGTQVPGTPP
PKYNTLRLERAFSNQLTDTQMLDEL"
BASE COUNT 898 a 935 c 900 g 783 t
ORIGIN
1 aagagcccgc ggtggcgctg ccaggggatg ctagcccgag agcgagcaga ggagcagcgc
61 acccgcacga gccttggacc ctttggaacc gaaagcacgc ccgtcctcag agtcccgtcc
121 tcaaagtccc atcctcgcca tggcacccgg agagaagatc aaagccaaaa tcaagaagaa
181 tctgcccgtg acgggccctc aggcgccgac cattaaagag ctgatgcggt ggtactgcct
241 caacaccaac acccatggct gtcgccgcat cgtggtgtcc cgcggccgtc tgcgccgcct
301 cctctggatc gggttcacac tgactgccgt ggccctcatc ctctggcagt gcgccctcct
361 cgtcttctcc ttctatactg tctcagtttc catcaaagtc cacttccgga agctggattt
421 tcctgcagtc accatctgca acatcaaccc ctacaagtac agcaccgttc gccaccttct
481 agctgacttg gaacaggaga ccagagaggc cctgaagtcc ctgtatggct ttccagagtc
541 ccggaagcgc cgagaggcgg agtcctggaa ctccgtctca gagggaaagc agcctagatt
601 ctcccaccgg attccgctgc tgatctttga tcaggatgag aagggcaagg ccagggactt
661 cttcacaggg aggaagcgga aagtcggcgg tagcatcatt cacaaggctt caaatgtcat
721 gcacatcgag tccaagcaag tggtgggatt ccaactgtgc tcaaatgaca cctccgactg
781 tgccacctac accttcagct cgggaatcaa tgccattcag gagtggtata agctacacta
841 catgaacatc atggcacagg tgcctctgga gaagaaaatc aacatgagct attctgctga
901 ggagctgctg gtgacctgct tctttgatgg agtgtcctgt gatgccagga atttcacgct
961 tttccaccac ccgatgcatg ggaattgcta tactttcaac aacagagaaa atgagaccat
1021 tctcagcacc tccatggggg gcagcgaata tgggctgcaa gtcattttgt acataaacga
1081 agaggaatac aacccattcc tcgtgtcctc cactggagct aaggtgatca tccatcggca
1141 ggatgagtat cccttcgtcg aagatgtggg aacagagatt gagacagcaa tggtcacctc
1201 tataggaatg cacctgacag agtccttcaa gctgagtgag ccctacagtc agtgcacgga
1261 ggacgggagt gacgtgccaa tcaggaacat ctacaacgct gcctactcgc tccagatctg
1321 ccttcattca tgcttccaga caaagatggt ggagaaatgt gggtgtgccc agtacagcca
1381 gcctctacct cctgcagcca actactgcaa ctaccagcag caccccaact ggatgtattg
1441 ttactaccaa ctgcatcgag cctttgtcca ggaagagctg ggctgccagt ctgtgtgcaa
1501 ggaagcctgc agctttaaag agtggacact aaccacaagc ctggcacaat ggccatctgt
1561 ggtttcggag aagtggttgc tgcctgttct cacttgggac caaggccggc aagtaaacaa
1621 aaagctcaac aagacagact tggccaaact cttgatattc tacaaagacc tgaaccagag
1681 atccatcatg gagagcccag ccaacagtat tgagatgctt ctgtccaact tcggtggcca
1741 gctgggcctg tggatgagct gctctgttgt ctgcgtcatc gagatcatcg aggtcttctt
1801 cattgacttc ttctctatca ttgcccgccg ccagtggcag aaagccaagg agtggtgggc
1861 ctggaaacag gctcccccat gtccagaagc tccccgtagc ccacagggcc aggacaatcc
1921 agccctggat atagacgatg acctacccac tttcaactct gctttgcacc tgcctccagc
1981 cctaggaacc caagtgcccg gcacaccgcc ccccaaatac aataccttgc gcttggagag
2041 ggccttttcc aaccagctca cagataccca gatgctggat gagctctgag gcagggttga
2101 gaagacagat ctagtcagga ccaccagcca tggtctaagg acatggatcg ggtgccccca
2161 gacgtgtgca caggggaccc tctgccccac tctgggcttt tcagatactc tgaccaaaaa
2221 gcctgcttta aaccgcaaga tggggcctgg gcatgcgcag gaggagccat cgggtactac
2281 gcagcaacac tcacaactgt ccaggctgag ataaatcccg ggacctgaac tattagcacg
2341 tcactagaga ctgggagccg aggcagtggt gctggcccaa gtgaaggcca gagtgaggac
2401 tgatgcagct ctctacgggt cttgagaggg aaggactctt ccaaagcccc aaagccgagg
2461 gtttcaccca cactgccagc ctgggttggg gcccaaggat gtgaccttga gtgtcaaggc
2521 tggacagcta ctgccagatg ccaaagatag gagaaagtgc cagccctgaa gctggagccg
2581 tttgtgaata aactgttctt catcattgac actggagaaa ggtgtcctcc atgccctcag
2641 gcagcagaga actggcccag ggcccttgga gtgttggtgg agatcagagt gccgtggtgg
2701 aggtctggga ctatgtcaga gtgtcctcac tttggggcat gggtgggccc aggagatgga
2761 tttagttatt caattttgtg gatgaataaa ttgaggcaca gaaagattaa gttaccggcc
2821 caaggtgaca cagtgaggag gtggcagagc taggatttga acccagacaa tctgactcca
2881 tgattttgca tccaattcgt gtctgtgcct tttaaagggt gaggtctgtg tcactttggg
2941 tggggagggg gagcatggtg ggccatgctc tgggcagctg ttccaagaca gagctgaccc
3001 ttccattacc aatggcctgt ccctcaccaa caagccaact gccacagatg acccacttca
3061 taccacattc acatctttcc acctgaaatg gctaacaggt attaaatcct tggttggtgt
3121 ttaaagccaa cccaagaaca gggtgttagg tactgtttta agcacctaga taggttagca
3181 taggggactg caaatggtgt tccgcaaagc aaatcctgtt tttgaccatg aactaagaat
3241 tttattttat tttatttttt attttttgta gaaataggat ctcactatgt tgcccaggct
3301 gttcttgaac tcctggcctc aaatgatctt cccacttcag cctcccaaag tgcagggatt
3361 acaggcacaa gccaccgtgc ccagccaaga atttttattt ttgcttttaa atagcaaaag
3421 aagaagattc tgtgactcat gaaaatgata tgagattcga attccagtgt ctataaataa
3481 agttttattg gtacacagca aaaaaaaaaa aaaaaa
//