LOCUS BC059386 3111 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens SKI-like oncogene, mRNA (cDNA clone MGC:71693
IMAGE:30332975), complete cds.
ACCESSION BC059386
VERSION BC059386.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3111)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3111)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254817.
FEATURES Location/Qualifiers
source 1..3111
/db_xref="H-InvDB:HIT000259986"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71693 IMAGE:30332975"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3111
/gene="SKIL"
/gene_synonym="SNO"
/gene_synonym="SnoA"
/gene_synonym="SnoN"
/db_xref="GeneID:6498"
/db_xref="HGNC:HGNC:10897"
/db_xref="MIM:165340"
CDS 672..2726
/gene="SKIL"
/gene_synonym="SNO"
/gene_synonym="SnoA"
/gene_synonym="SnoN"
/codon_start=1
/product="SKI-like oncogene"
/protein_id="AAH59386.1"
/db_xref="GeneID:6498"
/db_xref="HGNC:HGNC:10897"
/db_xref="MIM:165340"
/translation="MENLQTNFSLVQGSTKKLNGMGDDGSPPAKKMITDIHVNGKTIN
KVPTVKKEHLDDYGEAPVETDGEHVKRTCTSVPETLHLNPSLKHTLAQFHLSSQSSLG
GPAAFSARHSQESMSPTVFLPLPSPQVLPGPLLIPSDSSTELTQTVLEGESISCFQVG
GEKRLCLPQVLNSVLREFTLQQINTVCDELYIYCSRCTSDQLHILKVLGILPFNAPSC
GLITLTDAQRLCNALLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQGLF
APQFYVQPDAPCIQCLECCGMFAPQTFVMHSHRSPDKRTCHWGFESAKWHCYLHVNQK
YLGTPEEKKLKIILEEMKEKFSMRSGKRNQSKTDAPSGMELQSWYPVIKQEGDHVSQT
HSFLHPSYYLYMCDKVVAPNVSLTSAVSQSKELTKTEASKSISRQSEKAHSSGKLQKT
VSYPDVSLEEQEKMDLKTSRELCSRLDASISNNSTSKRKSESATCNLVRDINKVGIGL
VAAASSPLLVKDVICEDDKGKIMEEVMRTYLKQQEKLNLILQKKQQLQMEVKMLSSSK
SMKELTEEQQNLQKELESLQNEHAQRMEEFYVEQKDLEKKLEQIMKQKCTCDSNLEKD
KEAEYAGQLAELRQRLDHAEADRQELQDELRQEREARQKLEMMIKELKLQILKSSKTA
KE"
BASE COUNT 1069 a 538 c 637 g 867 t
ORIGIN
1 gtgcgggcga gcggcgacgg cggcggcggc gggcacagat taattaaaag aagaatgaac
61 tataatcctt gaaggtaact gggcaatttt ttaagtcgga ggctgttctt actggtgtga
121 ggatttacac acgtcttcag tttttcagca cagaccagca gaccatcatt tttagaggaa
181 atactccctc tgccctcctt tttggtttcc ttggtggtaa agattaaatt tggttgcatc
241 attttgactt gtgtttgagt ctaggtttta tggcacaagg aatggcataa acttttcatg
301 tgttttggtt aaaacaaacc agaccattgc attgaccctg gacatcttta attgagaaat
361 tggtaacttt attttaatat gtatatctga agaattcaag aaaacaaagg catcctcaga
421 ggtgtgcctc ttttctttat tattagaggc aaaacgaaca attttatagg atttgtagtg
481 aaattatacc agattataag gagaaccaaa actaagtcgc aaaatttatt aatttaaggg
541 gctctcgctt tgaaagtttg agagtaagtt acgataggca tttgtatcca ttcattactt
601 tcctcttttc aaataagcaa ctaaatagaa atgctaatct cagacttaat tatttaacag
661 aagagtgtac catggaaaac ctccagacaa atttctcctt ggttcagggc tcaactaaaa
721 aactgaatgg gatgggagat gatggcagcc ccccagcgaa aaaaatgata acggacattc
781 atgtaaatgg aaaaacgata aacaaggtgc caacagttaa gaaggaacac ttggatgact
841 atggagaagc accagtggaa actgatggag agcatgttaa gcgaacctgt acttctgttc
901 ctgaaacttt gcatttaaat cccagtttga aacacacatt ggcacaattc catttaagta
961 gtcagagctc gctgggtgga ccagcagcat tttctgctcg gcattcccaa gaaagcatgt
1021 cgcctactgt atttctgcct cttccatcac ctcaggttct tcctggccca ttgctcatcc
1081 cttcagatag ctccacagaa ctcactcaga ctgtgttgga aggggaatct atttcttgtt
1141 ttcaagttgg aggagaaaag agactctgtt tgccccaagt cttaaattct gttctccgag
1201 aatttacact ccagcaaata aatacagtgt gtgatgaact gtacatatat tgttcaaggt
1261 gtacttcaga ccagcttcat atcttaaagg tactgggcat acttccattc aatgccccat
1321 cctgtgggct gattacatta actgatgcac aaagattatg taatgcttta ttgcggccac
1381 gaacttttcc tcaaaatggt agcgtacttc ctgctaaaag ctcattggcc cagttaaagg
1441 aaactggcag tgcctttgaa gttgagcatg aatgcctagg caaatgtcag ggtttatttg
1501 caccccagtt ttatgttcag cctgatgctc cgtgtattca atgtctggag tgttgtggaa
1561 tgtttgcacc ccagacgttt gtgatgcatt ctcacagatc acctgacaaa agaacttgcc
1621 actggggctt tgaatcagct aaatggcatt gctatcttca tgtgaaccaa aaatacttag
1681 gaacacctga agaaaagaaa ctgaagataa ttttagaaga aatgaaggag aagtttagca
1741 tgagaagtgg aaagagaaat caatccaaga cagatgcacc atcaggaatg gaattacagt
1801 catggtatcc tgttataaag caggaaggtg accatgtttc tcagacacat tcatttttac
1861 accccagcta ctacttatac atgtgtgata aagtggttgc cccaaatgtg tcacttactt
1921 ctgctgtatc ccagtctaaa gagctcacaa agacagaggc aagtaagtcc atatcaagac
1981 agtcagagaa ggctcacagt agtggtaaac ttcaaaaaac agtgtcttat ccagatgtct
2041 cacttgagga acaggagaaa atggatttaa aaacaagtag agaattatgt agccgtttag
2101 atgcatcaat ctcaaataat tctacaagta aaaggaaatc tgagtctgcc acttgcaact
2161 tagtcagaga cataaacaaa gtgggaattg gccttgttgc tgccgcttca tctccgcttc
2221 ttgtgaaaga tgtcatttgt gaggatgata agggaaaaat catggaagaa gtaatgagaa
2281 cttatttaaa acaacaggaa aaactaaact tgattttgca aaagaagcaa caacttcaga
2341 tggaagtaaa aatgttgagt agttcaaaat ctatgaagga actcactgaa gaacagcaga
2401 atttacagaa agagcttgaa tctttgcaga atgaacatgc tcaaagaatg gaagaatttt
2461 atgttgaaca gaaagactta gagaaaaaat tggagcagat aatgaagcaa aaatgtacct
2521 gtgactcaaa tttagaaaaa gacaaagagg ctgaatatgc aggacagttg gcagaactga
2581 ggcagagatt ggaccatgct gaggccgata ggcaagaact ccaagatgaa ctcagacagg
2641 aacgggaagc aagacagaag ttagagatga tgataaaaga gctaaagctg caaattctga
2701 aatcatcaaa gactgctaaa gaatagaaac tgttaaagag attcatctgt gtattactga
2761 caaggttttt tttgtttgtt gcttgctttg gtaatcgaat tctgaagaat ttatctgcat
2821 gacgataact aggcattcta tccatttgta gatcagagaa agtgaagaga ttatatatta
2881 gtacttaaat ttttacattt tccaaatgaa tgaaaatgta tgtttctttg tactttttta
2941 aaaaaatcag cttagtaaca atactatatg gtttcaacta gtaggtaatc tgcttatatt
3001 tctaatgcaa acttaacaat tgtgtacttt ttaaaagctg caatatgtga tggaaaaaaa
3061 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaagaaaa aaaaaaaaaa a
//