LOCUS BC059381 3002 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens URB2 ribosome biogenesis 2 homolog (S. cerevisiae),
mRNA (cDNA clone IMAGE:30337179), partial cds.
ACCESSION BC059381
VERSION BC059381.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3002)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3002)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: c Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7661931.
FEATURES Location/Qualifiers
source 1..3002
/db_xref="H-InvDB:HIT000259981"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:30337179"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..>3002
/gene="URB2"
/gene_synonym="NPA2"
/db_xref="GeneID:9816"
/db_xref="HGNC:HGNC:28967"
CDS 130..>3002
/gene="URB2"
/gene_synonym="NPA2"
/codon_start=1
/product="URB2 protein"
/protein_id="AAH59381.1"
/db_xref="GeneID:9816"
/db_xref="HGNC:HGNC:28967"
/translation="MAAVYSGISLKLKSKTTSWEDKLKLAHFAWISHQCFLPNKEQVL
LDWARQSLVAFYKKKLELKEDIVERLWIYIDNILHSRKLQNLLKNGKTINLQISLVKI
INERVAEFSLSGSQRNICAVLRCCQGILSTPALAVIYTAKQELMVALLSQLCWSACRQ
PEGAVVAQLFEVIHLALGHYLLILQQQVNPRRAFGDVTAHLLQPCLVLRHLLSGGTWT
QAGQGQLRQVLSRDIRSQIEAMFRGGIFQPELLSSYKEGLLDQQQGDVKTGAMKNLLA
PMDTVLNRLVDAGYCAASLHTSVVANSVALLYKLFLDSYFKEGNQLLYFQVLPRLFGC
LKISHLQEEQSKALSTSDWTTELLVVEQLLNSVANNNIYNIAADRIRHEEAQFRFYRH
VAELLINHAQAPIPAWFRCLKTLISLNHLILEPDLDDLLASAWIDAEVTEFRTKKAQE
ALIRTVFQTYAKLRQVPRLFEEVLGVICRPAAEALRQPVLASGPSTVLSACLLELPPS
QILDTWSLVLEKFQSLVLPYLQSDADMALKSLSLSLLLHCIMFNMRSLDSSTPLPIVR
RTQCMMERMMRELVQPLLALLPDTPGPEPELWLQKVSDSVLLLSYTWAQVDAMFSLNC
SQYHSMSGPLIGVALEISNLPSLLPGVKTQHWKKIEKFTAQFSSLGTYCLEQLYLQKM
KRTLMQTSFRSEGAIQSLRCDAAFIIGSGRKSLNQRTTASWDGQVGMVSGLTYPVAHW
HLIVSNLTILISYLCPDDVGYLASVLLRTLPMGKAQEVSIDEEAYITLEKISKAFLHS
PLFPEMQSLHSAFLTCVTTSCSSILCSGAQRDSGLVSQQLPWLFEKDHMVVGHWENRF
AKAGPEGIEPRGEIAQNLLSLVKSDFPIQLEGGQLESILGLLEVISALQLDSLLPPYH
VHYFLVLLSMAVTKLGCSCSSSLALKFLTTCYQLLGYLQKKKK"
BASE COUNT 705 a 779 c 755 g 763 t
ORIGIN
1 ggacccgtac agcggcctcc gccgcaccgg gacagcagcc gccgccgctg ccgccgtcct
61 cccctgtcta cccggagctg tctcgagctg agccccctac cgggccggat cccgagataa
121 agcctagcca tggctgctgt ttattctggc atttccctta agcttaaaag caagacaact
181 tcctgggaag ataaactaaa actagctcac tttgcttgga tttctcacca gtgctttctt
241 ccaaataaag aacaagtgtt acttgattgg gcaagacaat cattggttgc attttataag
301 aaaaagcttg aactgaagga agatattgtt gaaaggcttt ggatctatat agataacatt
361 ttacatagca gaaaattgca gaatctcctc aagaatggaa agaccattaa tcttcagatt
421 tccctagtca agatcatcaa tgagagagta gctgagttct ctctttcggg atcccaaaga
481 aacatctgtg ctgtccttcg atgttgccag ggcatcctgt cgacacctgc cctggctgtc
541 atctacacgg ccaaacagga gctgatggtg gccttgctga gccagctttg ctggtcggcc
601 tgcaggcagc ccgaaggagc tgtggtagcc cagttgtttg aggtcattca cctggccctt
661 ggccattatc tcttgatcct gcagcagcag gtcaacccaa gacgtgcctt tggggatgtg
721 actgctcacc tgctccagcc gtgcctggtc ctgaggcact tactctctgg gggcacatgg
781 acgcaggctg gccagggcca gctgaggcag gtgctgagcc gggacatcag gagtcagatt
841 gaggccatgt tccgaggagg gatttttcag cctgagctac tgtcatccta caaggagggg
901 ctcttggacc agcagcaagg ggatgtgaag acgggagcca tgaagaacct tctggctccc
961 atggacaccg tgcttaacag gctggttgat gctggctact gtgcagcatc ccttcatacc
1021 tctgttgtgg ccaactcagt ggccttgctg tataagctct ttctagattc ttactttaag
1081 gagggaaacc agcttctcta cttccaggtt ctccccaggt tgtttggctg cttgaagatt
1141 tcacacctgc aggaggagca gagcaaagcc ctgtccacat cagattggac cacagagctt
1201 ttggttgtgg aacagctact aaactcagtg gccaacaaca atatctacaa catcgctgcc
1261 gacagaattc ggcacgaaga ggctcagttc cgcttttacc gccacgtggc tgagctgctg
1321 ataaaccatg cacaagcacc cataccggcc tggttccgct gtctgaagac tttgatatct
1381 ctgaatcatt tgattttgga gccagacctg gatgacctgc tggcttcagc gtggatcgat
1441 gccgaggtaa cagagtttcg aaccaaaaaa gcccaggagg cgcttattcg tactgtcttc
1501 cagacttatg ccaaactccg acaagtgcca cggttgtttg aagaggtttt gggggtgatc
1561 tgtcgtccag ctgctgaggc actgaggcag cctgtgctgg cctcgggccc ctccacggta
1621 ctctctgcat gcctcctgga gctgcctcca agtcagatcc tggacacgtg gtcccttgtg
1681 ctggagaagt tccagtcttt agtcttgccc tatttgcaga gtgatgccga catggccctg
1741 aaatcactgt cactgagctt gctgctgcac tgcatcatgt tcaacatgag gagcctggac
1801 agcagcacgc ctctgcccat tgtcagacgg acacagtgca tgatggagag gatgatgagg
1861 gagctcgtgc agcccctgct ggcccttctc ccggacaccc caggcccaga gccagagctg
1921 tggctgcaga aggtcagtga ctctgtgctc ctgctctctt acacttgggc ccaggtggac
1981 gctatgttca gtttgaactg tagccagtat cactctatgt ctgggcccct tataggtgtt
2041 gctctggaga tctcgaacct cccttcgttg ctcccaggtg taaaaacaca gcattggaag
2101 aagatagaga agtttacagc tcagttcagc tctcttggta catattgctt agaacagctg
2161 tacctgcaga aaatgaaaag gactttaatg caaactagtt tccggtctga aggagccatc
2221 caaagtttga ggtgcgatgc tgcctttatt attggttccg gcagaaaaag cttgaatcag
2281 agaacgacgg cttcctggga tggccaagtt gggatggtga gtggactcac ataccctgta
2341 gcacactggc acttgattgt gtcaaatctc acaattttaa tatcctatct gtgtccagat
2401 gatgtgggat acctggccag tgtcctgctg agaactttac ccatgggcaa agcccaggaa
2461 gtctcaatag atgaagaggc atacatcaca ctggaaaaaa tatccaaagc cttccttcat
2521 agccctctct ttccagagat gcagtccctt cattctgctt tcttaacgtg cgtaaccaca
2581 agttgctcca gcattctgtg ttctggtgcc cagcgtgact caggtcttgt cagtcagcag
2641 cttccctggc tttttgaaaa ggaccacatg gttgtgggtc attgggaaaa cagatttgca
2701 aaagctggac ccgaaggtat agaacctaga ggagaaattg cccagaactt actgtccctg
2761 gtcaagagtg acttccctat ccagctggag ggagggcagt tggaaagcat cctggggctt
2821 ttggaagtga tttctgcctt acagctggac agcctcttgc caccctatca tgtgcattat
2881 tttcttgtgt tactgtccat ggccgtcacc aaactaggat gctcttgctc ctcctcactg
2941 gctctcaagt tcttgacgac ttgctaccaa cttcttggtt acttgcaaaa aaaaaaaaaa
3001 aa
//