LOCUS BC059371 3426 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ring finger and WD repeat domain 3, mRNA (cDNA clone
MGC:71573 IMAGE:5266451), complete cds.
ACCESSION BC059371
VERSION BC059371.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3426)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3426)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: m Column: 17.
FEATURES Location/Qualifiers
source 1..3426
/db_xref="H-InvDB:HIT000259971"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71573 IMAGE:5266451"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3426
/gene="RFWD3"
/gene_synonym="FLJ10520"
/gene_synonym="RNF201"
/db_xref="GeneID:55159"
/db_xref="HGNC:HGNC:25539"
CDS 48..2372
/gene="RFWD3"
/gene_synonym="FLJ10520"
/gene_synonym="RNF201"
/codon_start=1
/product="ring finger and WD repeat domain 3"
/protein_id="AAH59371.2"
/db_xref="GeneID:55159"
/db_xref="HGNC:HGNC:25539"
/translation="MAHEAMEYDVQVQLNHAEQQPAPAGMASSQGGPALLQPVPADVV
SSQGVPSILQPAPAEVISSQATPPLLQPAPQLSVDLTEVEVLGEDTVENINPRTSEQH
RQGSDGNHTIPASSLHSMTNFISGLQRLHGMLEFLRPSSSNHSVGPMRTRRRVSASRR
ARAGGSQRTDSARLRAPLDAYFQVSRTQPDLPATTYDSETRNPVSEELQVSSSSDSDS
DSSAEYGGVVDQAEESGAVILEEQLAGVSAEQEVTCIDGGKTLPKQPSPQKSEPLLPS
ASMDEEEGDTCTICLEQWTNAGDHRLSALRCGHLFGYRCISTWLKGQVRKCPQCNKKA
RHSDIVVLYARTLRALDTSEQERMKSSLLKEQMLRKQAELESAQCRLQLQVLTDKCTK
LQRRVQDLQKLTSHQSQNLQQPRGSQAWVLSCSPSSQGQHKHKYHFQKTFTVSQAGNC
RIMAYCDALSCLVISQPSPQASFLPGFGVKMLSTANMKSSQYIPMHGKQIRGLAFSSY
LRGLLLSASLDNTIKLTSLETNTVVQTYNAGRPVWSCCWCLDEANYIYAGLANGSILV
YDVRNTSSHVQELVAQKARCPLVSLSYMPRAASAAFPYGGVLAGTLEDASFWEQKMDF
SHWPHVLPLEPGGCIDFQTENSSRHCLVTYRPDKNHTTIRSVLMEMSYRLDDTGNPIC
SCQPVHTFFGGPTCKLLTKNAIFQSPENDGNILVCTGDEAANSALLWDAASGSLLQDL
QTDQPVLDICPFEVNRNSYLATLTEKMVHTYKWE"
BASE COUNT 913 a 797 c 847 g 869 t
ORIGIN
1 gtcttcggcg ggctcgcgag cccggccgcg gcctgctggt ttcagtgatg gctcatgaag
61 caatggaata tgatgttcag gtgcagttaa atcatgccga acaacagcca gctcctgctg
121 gcatggccag cagccaaggg ggaccagccc tcctccagcc tgttcctgct gatgtggtca
181 gcagccaggg ggtaccatcc atcctccagc cagctcctgc tgaggtgatc agcagccaag
241 cgacaccacc cctgctccag cctgctccgc aactgtctgt tgacctgaca gaagtggagg
301 tcttgggaga agacactgtg gagaacatca atccaagaac ttcagaacaa cataggcagg
361 gatctgatgg taatcacacc atcccagcat cttcgttgca ttcaatgacc aacttcatca
421 gcggactgca gagacttcat ggcatgctgg aattcctgag accttcatct tcaaaccaca
481 gtgtagggcc aatgagaaca agaaggaggg tatctgcttc acggagggca agagccggag
541 ggtctcagag gacagacagt gccaggttga gagcaccatt ggatgcttac tttcaggtga
601 gcaggaccca gcctgacttg ccagctacca cttatgattc agagactagg aatcctgtat
661 ctgaagagtt gcaggtgtct agtagttctg attctgacag tgacagctct gcagagtatg
721 gaggggttgt tgaccaggca gaggaatctg gagctgtcat tttagaagag caactagcag
781 gtgtctcagc agagcaagaa gttacatgta tcgatggagg caagaccctc cccaaacagc
841 catctcccca gaagtctgag cctctgctac cttctgcttc tatggatgag gaagaagggg
901 acacttgtac aatatgtctg gaacagtgga ccaatgctgg ggaccaccgg ctctcagcat
961 tacgctgtgg gcatctcttt gggtataggt gcatttccac gtggcttaaa ggacaagtac
1021 gaaaatgtcc ccagtgcaac aagaaagcca ggcacagtga cattgtcgtc ctttatgccc
1081 gaaccctgag agctttggac actagtgaac aggagcgcat gaaaagttcc ctactgaagg
1141 aacagatgct aaggaaacag gccgagttag aatcagcaca gtgccgactc caactgcagg
1201 tcctcactga taagtgcact aagcttcaaa ggcgtgttca ggacttgcaa aaacttacgt
1261 cacatcaaag tcagaattta cagcaaccca ggggctccca agcatgggtc ctgagctgct
1321 caccctccag ccagggccag cacaagcaca agtaccactt ccaaaagacc ttcacagtat
1381 ctcaggcagg aaactgccgg atcatggcat actgtgatgc tctgagctgc ctggtgatat
1441 cacagccttc tcctcaggcc tcttttcttc caggctttgg tgttaagatg ttgagtactg
1501 ccaacatgaa gagcagtcag tacattccga tgcatggcaa acagatccgt ggactggcgt
1561 ttagcagtta cctcagaggc ttgctactct ctgcttccct agacaacact attaaactga
1621 ccagcctgga gacaaatacc gtggtccaga cttataatgc tggacgtcct gtctggagct
1681 gttgctggtg tcttgatgag gctaactaca tctatgctgg actggccaat ggttcaattc
1741 tggtatatga cgtgcgaaac acgagcagtc atgtgcagga gttagtagct cagaaagcca
1801 gatgcccact ggtctccctg tcatacatgc ccagagctgc ctcagctgca tttccatatg
1861 gtggggtgct ggctggaacc ttggaggatg cttcattctg ggaacagaaa atggactttt
1921 ctcattggcc tcatgtgctg cccttggagc cagggggctg catagacttt cagacagaga
1981 acagctcccg gcactgtctt gtgacctaca ggcctgataa aaatcacacc accatacgaa
2041 gtgtgctgat ggaaatgtcc taccgactgg atgacactgg aaatccaatc tgctcctgcc
2101 agcctgtaca tacatttttt ggaggaccta cttgcaaact attgaccaaa aatgccattt
2161 tccaaagccc agagaatgat ggcaacatcc tggtgtgtac tggggatgaa gcagcaaatt
2221 ctgccctgct gtgggatgct gccagtggct cgttgctcca ggacctacag accgatcagc
2281 ctgtgttgga catctgccca tttgaggtga accgtaacag ctacttggct accttaacag
2341 agaagatggt ccacacctat aagtgggagt gactgtggtc tcgaaacctt gaaggcatgc
2401 tgctggttag atgttgtttg ctagcgccta gcagccccaa gcaagatccc tgtttattgt
2461 ctgcagtcta gaacattggg aatcatggtt tgtttgcatt agtatgattc taggacccta
2521 ggtcactgag acactacaga ttgtgtatct gttatgtcca ctaaaagagt aattgatggg
2581 tactttatct acattatcca tttcttgggt ttaaagcctt cattaaccat tattgtatgt
2641 tggaaattct tattttcttt attttctgtg tgactttctg gaccttagag agtgtcctct
2701 catcatctag gatgtgagtg ggcatcaagc attttctggg gaatatgaca tcccatctga
2761 gttgtcctgt cacttaagta tccttgaagg gactaaccat cgtcttggta ctgatttgat
2821 gcaacgtaga tgtaaaagag tattattcag ttgaacacaa gagggcactg tagaaccttg
2881 tgtccggttt atttctgacc ttgaaggctg acaatctttt agtaacttgt ctcatctcca
2941 cacaagtgtg tgatagcaca cctgggtgtg ctttgtggca ataacacttg tgttccaggt
3001 gtgaagtgct gggacattgg caggcccagt gatggaagca gctagtgaac gattcccttt
3061 gctaatgcct agtgcattaa gttcattgct ttgcgaaagg taaggaaaga ggccagttgt
3121 ttgagcggtg gggaagattt tgttttttct agccagctta ggatctcagg attggtttta
3181 tccaagctag tgctttgaag aacactatct cttgccagga aaagatgagt gataggtcaa
3241 agcttttact tgagtctccc ctagtgtcag agatcaggag aaaagacata agagaattta
3301 caaaagctat tcagactgct attgaaaaca tgagaagaac ttgtctccca ttttgagagt
3361 tcctatctaa ataaagccaa ttcctcagaa aaaaaaaaaa aaaaaaaaag aaaaaaaaaa
3421 aaaaaa
//