LOCUS BC059363 3211 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3, mRNA
(cDNA clone MGC:71526 IMAGE:30341233), complete cds.
ACCESSION BC059363
VERSION BC059363.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3211)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3211)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23308723.
FEATURES Location/Qualifiers
source 1..3211
/db_xref="H-InvDB:HIT000259963"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71526 IMAGE:30341233"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3211
/gene="ST6GALNAC3"
/gene_synonym="PRO7177"
/gene_synonym="ST6GALNACIII"
/db_xref="GeneID:256435"
/db_xref="HGNC:HGNC:19343"
/db_xref="MIM:610133"
CDS 135..1052
/gene="ST6GALNAC3"
/gene_synonym="PRO7177"
/gene_synonym="ST6GALNACIII"
/codon_start=1
/product="ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3"
/protein_id="AAH59363.1"
/db_xref="GeneID:256435"
/db_xref="HGNC:HGNC:19343"
/db_xref="MIM:610133"
/translation="MACILKRKSVIAVSFIAAFLFLLVVRLVNEVNFPLLLNCFGQPG
TKWIPFSYTYRRPLRTHYGYINVKTQEPLQLDCDLCAIVSNSGQMVGQKVGNEIDRSS
CIWRMNNAPTKGYEEDVGRMTMIRVVSHTSVPLLLKNPDYFFKEANTTIYVIWGPFRN
MRKDGNGIVYNMLKKTVGIYPNAQIYVTTEKRMSYCDGVFKKETGKDRVQSGSYLSTG
WFTFILAMDACYGIHVYGMINDTYCKTEGYRKVPYHYYEQGRDECDEYFLHEHAPYGG
HRFITEKKVFAKWAKKHRIIFTHPNWTLS"
BASE COUNT 984 a 620 c 637 g 970 t
ORIGIN
1 ggtcccctta tttggatctg cgggaatgtg ggctggagag gtcctgccgt ggtaccagcc
61 tccagcctgc ccccaggact gcccctgacc caggcgcgcc cgctgctcgg tggcaggagg
121 gccggcggag cgccatggcc tgcatcctga agagaaagtc tgtgattgct gtgagcttca
181 tagcagcgtt ccttttcctg ctggttgtgc gtcttgtaaa tgaagtgaat ttcccattgc
241 tactaaactg ctttggacaa cctggtacaa agtggatacc attctcctac acatacaggc
301 ggccccttcg aactcactat ggatacataa atgtgaagac acaagagcct ttgcaactgg
361 actgtgacct ttgtgccata gtgtcaaact caggtcagat ggttggccag aaggtgggaa
421 atgagataga tcgatcctcc tgcatttgga gaatgaacaa tgcccccacc aaaggttatg
481 aagaagatgt cggccgcatg accatgattc gagttgtgtc ccataccagc gttcctcttt
541 tgctaaaaaa ccctgattat tttttcaagg aagcgaatac tactatttat gttatttggg
601 gacctttccg caatatgagg aaagatggca atggcatcgt ttacaacatg ttgaaaaaga
661 cagttggtat ctatccgaat gcccaaatat acgtgaccac agagaagcgc atgagttact
721 gtgatggagt ttttaagaag gaaactggga aggacagagt ccagtctggc tcatatctca
781 gcacagggtg gtttaccttc attctggcca tggacgcctg ttatggcatt cacgtctacg
841 ggatgataaa tgacacctac tgcaagacag aagggtatag aaaagtcccc taccattatt
901 atgaacaagg aagagatgag tgtgatgaat attttcttca tgaacatgcc ccatatgggg
961 gtcataggtt tatcactgaa aagaaagtgt ttgctaaatg ggccaagaag cacaggataa
1021 tatttacaca tccaaactgg acattgtctt gataatggtt ttcctgatct tgccgcatca
1081 cttaatgtga tccccatact gcaactgtga tgctgatgat gctaatggag atgatggtaa
1141 tgataaagac aacaacaatg attatcaagt tcctgtacac tctcagatgt ggatggtgac
1201 tctgctagta atttaaactt ggcatttcat ggaggatggt tgtgctcatg atgttctttc
1261 tggaggttca acactacgta ccgcacttta taatttaact ggaattgaga tgaaggccag
1321 tgacatgaca actgtgacct aagaaatggg aagattatct ttcaagatag ctgcctagaa
1381 ttgttcgaca gtgagtaact tccagaagcc aaaagagttt ggcttcatga ggcaaggtga
1441 ttgactcaat ggcttgttga atctcagcag ttccgccatc ttgaagaatg attgattgtc
1501 aaacactgac ccaagaactg ctatcagggt gcaagtatct tactagttag cctaaggatg
1561 ggaaaatatc tcttcctaat ataccatctt tctacagtat ttcctacagc taaagcctca
1621 ggccattgcc taattaacaa tgaagatttc atggacatcc tacacttcag gattacttga
1681 ctatctcaaa cacataaatc aaaatgggcc aagtagcaaa tcttgatgaa tttccactct
1741 taccatccat tcttactacc aacagtataa ctgaacatgt gattagaatg atctatatta
1801 atgtttagtt atttttggtt gagtgctaaa tatttcagaa ggctacttaa catgtaagat
1861 accaacttca acactgtaat aacatatact gtgaaaacat tcctaaaaag taaccaaagg
1921 gtttgctaac tctgcttcaa catccaacaa cacaaaacta tatgattttt aaaatcatga
1981 aatagagaca gcaaagcata tttttacatc aatttgtatc ctatcatact tcataatata
2041 tatttgtata ttcaaatttc tattttatag gcccaaggtg tgtttctcca aacattacat
2101 tctcattgcc aagtgccagc tgttacacat ggagaagaaa tgattcctta tattaaacct
2161 gaccagagct ttttgccttc tagggattta tttttcccat agtgtatcag ttgttatgcc
2221 acaataacaa caataataat gttcttaatg tccaaagtgc tttgtcattt agagtccttt
2281 aacatctgtt ataccatgtg atgcccttga acaccccatt gggctattgt ctgtgtattc
2341 tgctctcttt agcagatgat ctgtaatttg gtcattgttc tgttatattc cagattgctc
2401 tacttgctaa tatttgtata gaatagaatt tatgtaaact agtaaccagt tgatctctgt
2461 gccaaataca ttatatcagg attacacaaa aagtatcaca aaggatggtc ttggccatat
2521 gctagggccc ctgtgaaaat aagtagtttt gagaagtttt tctatatacg tatatataca
2581 cgtgtggttc tatttaggtg gggaaaaaat gaaaaagcag ggacaacagg aggaaatgaa
2641 ggcagagaaa tatagtttcc tttcctagga ttgagacaat tctatttttc atatactcgt
2701 tgctcattaa atagtaaagg gttgatttgc tgcaagagta gctgagaatt caaaaacatc
2761 cttgcagaat gattcaaaag acaaaagcca ggctcaactt atagaatgtt ttggaaactg
2821 gaagtaatga tacatttcac ttcagaagca cttgtaggtc tttactagtg ctaagtatta
2881 tggtgagcta tcattaaagt gtgccatctt ggataaaggc cttttgccta ctctcttctg
2941 caattttgac acctcaatat tcacacccat aaacattact aagccccagt tctatcgttg
3001 gaaggagttg ttattctttt gttgttccct tatgcaattt ttaattctat gaatgttaag
3061 tttttttgag ctaatgatag atagaaatgc ccactcaaag aaaaataaac agagacaaat
3121 gttaaaattg ccatacagac tgtttttccc cctgttgttt cactttaaaa taaaaagaaa
3181 tccttgatta atcagaaaaa aaaaaaaaaa a
//