LOCUS BC059358 2365 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens RAB3A interacting protein (rabin3), mRNA (cDNA clone
MGC:71495 IMAGE:5300636), complete cds.
ACCESSION BC059358
VERSION BC059358.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2365)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2365)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28274698.
FEATURES Location/Qualifiers
source 1..2365
/db_xref="H-InvDB:HIT000259958"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71495 IMAGE:5300636"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2365
/gene="RAB3IP"
/gene_synonym="FLJ22548"
/gene_synonym="RABIN3"
/db_xref="GeneID:117177"
/db_xref="MIM:608686"
CDS 161..1108
/gene="RAB3IP"
/gene_synonym="FLJ22548"
/gene_synonym="RABIN3"
/codon_start=1
/product="RAB3IP protein"
/protein_id="AAH59358.1"
/db_xref="GeneID:117177"
/db_xref="MIM:608686"
/translation="MANDPLEGFHEVNLASPTSPDLLGVYESGTQEQTTSPSVIYRPH
PSALSSVPIQANALDVSELPTQPVYSSPRRLNCAEISSISFHVTDPAPCSTSGVTAGL
TKLTTRKDNYNAEREFLQGATITEACDGSDDIFGLSTDSLSRLRSQSVLEVREKGYER
LKEELAKAQRELKLKDEECERLSKVRDQLGQELEELTASLFEEAHKMVREANIKQATA
EKQLKEAQGKIDVLQAEVAALKTLVLSSSPTSPTQEPLPGGKTPFKKGHTRNKSTSSA
MSGSHQDLSVIQPIVKDCKEVTHQGLSPLTLLILVSSHH"
BASE COUNT 739 a 440 c 519 g 667 t
ORIGIN
1 gtggtgagcc cgccgccgtg gagtgtagcg gaaagggctc gccgtcctcc tccgtttctc
61 gctgcttcgg gacgcgctct ctgcggctct gtgagcgccc ctgagcgccg gcagcggccg
121 cggtgggttc ttcaggttat cttatgatga ggcttttgct atggctaatg atcccttgga
181 aggcttccat gaagtaaacc ttgcttcacc tacttctccg gaccttcttg gtgtgtatga
241 atcaggaact caagagcaga ctacctcacc aagtgtcatc taccggccac acccttcagc
301 tttatcctct gtacctatcc aggcaaatgc attagatgtt tctgaacttc ctacacaacc
361 cgtgtattca tcccccagac gtttaaattg tgcggaaata tctagtatca gctttcatgt
421 tacagaccca gccccttgct ctacctctgg agtcacagct ggattaacta aattaactac
481 aagaaaggac aactataatg cagagagaga gtttttacag ggtgctacta taacagaggc
541 ttgcgatggc agtgatgata tttttgggtt gagtactgat agtctgtctc gtttacgaag
601 ccaatctgtt ttggaagtta gagaaaaggg ctatgaacga ttaaaagaag aactcgcaaa
661 agctcagagg gaactgaagt taaaagatga agaatgtgag aggctttcaa aagtgcgaga
721 tcaacttgga caggaattgg aagaactcac agctagtcta tttgaggaag ctcataaaat
781 ggtgagagaa gcaaatatca agcaggcaac agcagaaaaa cagctaaaag aagcacaagg
841 aaaaattgat gtacttcaag ctgaagtagc tgcattgaag acacttgtat tgtccagttc
901 tccaacatca cctacgcagg agcctttgcc aggtggaaag acacctttta aaaaggggca
961 tacaagaaat aaaagcacaa gcagtgctat gagtggcagt catcaggacc tcagtgtgat
1021 acagccaatt gtaaaagact gcaaagaggt aactcatcaa ggactgtccc ctctgactct
1081 gttgatactt gttagttctc atcactgagg tgtcagttat catttttgcc agcaaaattt
1141 ttagtacaaa ataatgcagt attaagatgg gggaggcttt atctagagct ggctgctttc
1201 agggattctt cagttccatt ttctacctgg ctgaccttgg agtacctgct ggaaacttgg
1261 taagtttctt aatctcagta tttcattaag ggaggaaact gtcatgtgtt gtctagagga
1321 gagtgggtgg ctttaatgat ctggctagtc aaaatttatt gctagagtgc gcttacaaag
1381 tatggatata agaaatatgt ggaaataaga tgattttctt aaagatcaat acattgcttt
1441 tatttaaatt cagagagaat tttatgtcag caagggagtc ctagagttaa tttagataat
1501 taagcaacaa aaaaatagaa ataatggtag ccttacaatg acataaggct ggaagacatt
1561 ttgctaagtg aaatttcaag ttatagtaga acaattagtg tcatttttga tcccaaatta
1621 ggtttcacag ttcagccagt ctgttattca gacacttaca actatgtaag gccaccatta
1681 tcatgtatcc ataacaatta aaaatttaaa aacgaaataa tgggccgggc atggtggctc
1741 atgcctgtaa tctcagcact ttgggaggcc aaggccggag gatcacctga ggttgggagt
1801 tcgagaccag cctgaccaac atggagaaac cctatctgta ctaaaaatat aaaattagct
1861 gggcatggta tctcatgctt ataatcccag ctactcagga ggctgaggca ggagaatccc
1921 ttgaacctgg gaggcggagg ttgcggtcag ctgagattgc gccatcacac tccagcctgg
1981 gcaacaagag cgaaactctg tctcaaaatc ataataataa taatagtctt attttaaaag
2041 atatgttaca aagataactg aaataatata taaatatttt gagctgttta gagtaaaaat
2101 ttttaatcat tgtatactgt gagaatgcat ttctaagagg attgatcaat aatttatgaa
2161 gctttcccat ttcttcttag aagccatctt ttacattgtt aaattcaagt ccatcattaa
2221 tcttgaagaa atgtgtgtgc ttgttaaatt tttgtatgga agccaggagt ttattaaatg
2281 gaataaccaa tgttaacctg ttttaattga attgcatttt gacgaattat caataaaaat
2341 gatgctggca aaaaaaaaaa aaaaa
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