LOCUS BC058919 1810 bp mRNA linear HUM 16-NOV-2018
DEFINITION Homo sapiens selenoprotein P, plasma, 1, mRNA (cDNA clone MGC:65090
IMAGE:6195379), complete cds.
ACCESSION BC058919
VERSION BC058919.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
REFERENCE 3 (bases 1 to 1810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-NOV-2018) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK Sequence update by database staff to remove vector contamination
COMMENT On Nov 16, 2018 this sequence version replaced BC058919.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: o Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 62530390.
FEATURES Location/Qualifiers
source 1..1810
/db_xref="H-InvDB:HIT000259929"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65090 IMAGE:6195379"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1810
/gene="SEPP1"
/gene_synonym="SELP"
/gene_synonym="SeP"
/db_xref="GeneID:6414"
/db_xref="HGNC:HGNC:10751"
/db_xref="MIM:601484"
CDS 61..1206
/gene="SEPP1"
/gene_synonym="SELP"
/gene_synonym="SeP"
/codon_start=1
/transl_except=(pos:235..237,aa:Sec)
/transl_except=(pos:958..960,aa:Sec)
/transl_except=(pos:1012..1014,aa:Sec)
/transl_except=(pos:1048..1050,aa:Sec)
/transl_except=(pos:1093..1095,aa:Sec)
/transl_except=(pos:1114..1116,aa:Sec)
/transl_except=(pos:1159..1161,aa:Sec)
/transl_except=(pos:1165..1167,aa:Sec)
/transl_except=(pos:1186..1188,aa:Sec)
/transl_except=(pos:1192..1194,aa:Sec)
/product="selenoprotein P, plasma, 1"
/protein_id="AAH58919.1"
/db_xref="GeneID:6414"
/db_xref="HGNC:HGNC:10751"
/db_xref="MIM:601484"
/translation="MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLN
SNGSVTVVALLQASUYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTH
LKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVE
EAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHL
GSSELSENQQPGAPNTPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKL
CRKRCINQLLCKLPTDSELAPRSUCCHCRHLIFEKTGSAITUQCKENLPSLCSUQGLR
AEENITESCQURLPPAAUQISQQLIPTEASASURUKNQAKKUEUPSN"
BASE COUNT 597 a 362 c 327 g 524 t
ORIGIN
1 cagagtaaag caaagagaaa ggaagcaggc ccgttggaag tggttgtgac aaccccagca
61 atgtggagaa gcctggggct tgccctggct ctctgtctcc tcccatcggg aggaacagag
121 agccaggacc aaagctcctt atgtaagcaa cccccagcct ggagcataag agatcaagat
181 ccaatgctaa actccaatgg ttcagtgact gtggttgctc ttcttcaagc cagctgatac
241 ctgtgcatac tgcaggcatc taaattagaa gacctgcgag taaaactgaa gaaagaagga
301 tattctaata tttcttatat tgttgttaat catcaaggaa tctcttctcg attaaaatac
361 acacatctta agaataaggt ttcagagcat attcctgttt atcaacaaga agaaaaccaa
421 acagatgtct ggactctttt aaatggaagc aaagatgact tcctcatata tgatagatgt
481 ggccgtcttg tatatcatct tggtttgcct ttttccttcc taactttccc atatgtagaa
541 gaagccatta agattgctta ctgtgaaaag aaatgtggaa actgctctct cacgactctc
601 aaagatgaag acttttgtaa acgtgtatct ttggctactg tggataaaac agttgaaact
661 ccatcgcctc attaccatca tgagcatcat cacaatcatg gacatcagca ccttggcagc
721 agtgagcttt cagagaatca gcaaccagga gcaccaaata ctcctactca tcctgctcct
781 ccaggccttc atcaccacca taagcacaag ggtcagcata ggcagggtca cccagagaac
841 cgagatatgc cagcaagtga agatttacaa gatttacaaa agaagctctg tcgaaagaga
901 tgtataaatc aattactctg taaattgccc acagattcag agttggctcc taggagctga
961 tgctgccatt gtcgacatct gatatttgaa aaaacagggt ctgcaatcac ctgacagtgt
1021 aaagaaaacc tcccatcttt atgtagctga cagggacttc gggcagagga gaacataact
1081 gaatcttgtc agtgacgttt gcctccagct gcctgacaaa taagtcagca gcttataccc
1141 acagaagcca gtgccagttg acgctgaaag aatcaggcaa aaaagtgaga atgaccttca
1201 aactaaatat ttaaaatagg acatactccc caatttagtc tagacacaat ttcatttcca
1261 gcatttttat aaactaccaa attagtgaac caaaaataga aatcagattt gtgcaaacat
1321 ggagaaatct actgaattgg cttccagatt ttaaatttta tgtcatagaa atattgactc
1381 aaaccatatt ttttatgatg gagcaactga aaggtgattg cagcttttgg ttaatatgtc
1441 tttttttttc tttttccagt gttctatttg ctttaatgag aatagaaacg taaactatga
1501 cctaggggtt tctgttggat aattagcagt ttagaatgga ggaagaacaa caaagacatg
1561 ctttccattt ttttctttac ttatctctca aaacaatatt actttgtctt ttcaatcttc
1621 tacttttaac taataaaata agtggatttt gtattttaag atccagaaat acttaacacg
1681 tgaatatttt gctaaaaaag catatataac tattttaaat atccatttat cttttgtata
1741 tctaagactc atcctgattt ttactatcac acatgaataa agcctttgta tctttaaaaa
1801 aaaaaaaaaa
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