LOCUS BC058896 1543 bp mRNA linear HUM 20-OCT-2003 DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 9, mRNA (cDNA clone IMAGE:6501532), partial cds. ACCESSION BC058896 VERSION BC058896.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1543) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1543) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: p Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13514821. FEATURES Location/Qualifiers source 1..1543 /db_xref="H-InvDB:HIT000259906" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6501532" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1543 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /db_xref="GeneID:1660" /db_xref="MIM:603115" CDS <1..1211 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /codon_start=3 /product="DHX9 protein" /protein_id="AAH58896.1" /db_xref="GeneID:1660" /db_xref="MIM:603115" /translation="IMGCIFYVGDAICTIAAATCFPEPFINEGKRLGYIHRNFAGNRF SDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFP EDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVN CPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIVLVDD WIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPVNERMLNMIRQISRPSAA GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS ANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGY FGQGRGGGGY" misc_feature 3..683 /gene="DHX9" /gene_synonym="DDX9" /gene_synonym="LKP" /gene_synonym="NDH II" /gene_synonym="NDHII" /gene_synonym="RHA" /note="HrpA; Region: HrpA-like helicases [DNA replication, recombination, and repair]" /db_xref="CDD:COG1643" BASE COUNT 429 a 287 c 384 g 443 t ORIGIN 1 tgataatggg gtgtattttc tacgtgggag atgctatctg taccattgct gctgctacct 61 gctttccaga gcctttcatc aatgaaggaa agcggctggg ctatatccat cgaaattttg 121 ctggaaacag attttctgat cacgtagccc ttttatcagt attccaagcc tgggatgatg 181 ctagaatggg tggagaagaa gcagagatac gtttttgtga gcacaaaaga cttaatatgg 241 ctacactaag aatgacctgg gaagccaaag ttcagctcaa agagattttg attaattctg 301 ggtttccaga agattgtttg ttgacacaag tgtttactaa cactggacca gataataatt 361 tggatgttgt tatctccctc ctggcctttg gtgtgtaccc caatgtatgc tatcataagg 421 aaaagaggaa gattctcacc actgaagggc gtaatgcact tatccacaaa tcatctgtta 481 attgtccttt tagtagccaa gacatgaagt acccatctcc cttctttgta tttggtgaaa 541 agattcgaac tcgagccatc tctgctaaag gcatgacttt agtcaccccc ctgcagttgc 601 ttctctttgc ctccaagaaa gtccaatctg atgggcagat tgtgcttgta gatgactgga 661 ttaaactgca aatatctcat gaagctgctg cctgtatcac tggtctccgg gcagccatgg 721 aggctttggt tgttgaagta accaaacaac ctgctatcat cagccagttg gaccccgtaa 781 atgaacgtat gctgaacatg atccgtcaga tctctagacc ctcagctgct ggtatcaacc 841 ttatgattgg cagtacacgg tatggagatg gtccacgtcc tcccaagatg gcccgatacg 901 acaatggaag cggatataga aggggaggtt ctagttacag tggtggaggc tatggcggtg 961 gctatagcag tggaggctat ggtagcggag gctatggtgg cagcgccaac tcctttcggg 1021 caggatatgg tgcaggtgtt ggtggaggct atagaggagt ttcccgaggt ggctttagag 1081 gcaactctgg aggagactac agagggccta gtggaggcta cagaggatct gggggattcc 1141 agcgaggagg tggtaggggg gcctatggaa ctggctactt tggacaggga agaggaggtg 1201 gcggctatta aaacttggtt atgtcagttc ctgtgtgtag acagtaagga aaaaaaggca 1261 tgctatgtgt tacgtgtttt ttccagtatg tttatttgcc accaaaaagt aaatgcattt 1321 tcacccattc tgtggttcat tgtagtttaa ggaaaccaag catatagatg cattagtgat 1381 tttgtttata ttatgtaaaa tataacgatc tcttaaaaat accacagttt gtattttttc 1441 tttaaggagt aaagatttgc ctttaaataa cttggtattt tcctggcttt cgtttaatac 1501 aatagaaaat aaagtattac accgaaaaaa aaaaaaaaaa aaa //