LOCUS BC058896 1543 bp mRNA linear HUM 20-OCT-2003
DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 9, mRNA (cDNA
clone IMAGE:6501532), partial cds.
ACCESSION BC058896
VERSION BC058896.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1543)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1543)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: p Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13514821.
FEATURES Location/Qualifiers
source 1..1543
/db_xref="H-InvDB:HIT000259906"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6501532"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1543
/gene="DHX9"
/gene_synonym="DDX9"
/gene_synonym="LKP"
/gene_synonym="NDH II"
/gene_synonym="NDHII"
/gene_synonym="RHA"
/db_xref="GeneID:1660"
/db_xref="MIM:603115"
CDS <1..1211
/gene="DHX9"
/gene_synonym="DDX9"
/gene_synonym="LKP"
/gene_synonym="NDH II"
/gene_synonym="NDHII"
/gene_synonym="RHA"
/codon_start=3
/product="DHX9 protein"
/protein_id="AAH58896.1"
/db_xref="GeneID:1660"
/db_xref="MIM:603115"
/translation="IMGCIFYVGDAICTIAAATCFPEPFINEGKRLGYIHRNFAGNRF
SDHVALLSVFQAWDDARMGGEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSGFP
EDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEKRKILTTEGRNALIHKSSVN
CPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFASKKVQSDGQIVLVDD
WIKLQISHEAAACITGLRAAMEALVVEVTKQPAIISQLDPVNERMLNMIRQISRPSAA
GINLMIGSTRYGDGPRPPKMARYDNGSGYRRGGSSYSGGGYGGGYSSGGYGSGGYGGS
ANSFRAGYGAGVGGGYRGVSRGGFRGNSGGDYRGPSGGYRGSGGFQRGGGRGAYGTGY
FGQGRGGGGY"
misc_feature 3..683
/gene="DHX9"
/gene_synonym="DDX9"
/gene_synonym="LKP"
/gene_synonym="NDH II"
/gene_synonym="NDHII"
/gene_synonym="RHA"
/note="HrpA; Region: HrpA-like helicases [DNA replication,
recombination, and repair]"
/db_xref="CDD:COG1643"
BASE COUNT 429 a 287 c 384 g 443 t
ORIGIN
1 tgataatggg gtgtattttc tacgtgggag atgctatctg taccattgct gctgctacct
61 gctttccaga gcctttcatc aatgaaggaa agcggctggg ctatatccat cgaaattttg
121 ctggaaacag attttctgat cacgtagccc ttttatcagt attccaagcc tgggatgatg
181 ctagaatggg tggagaagaa gcagagatac gtttttgtga gcacaaaaga cttaatatgg
241 ctacactaag aatgacctgg gaagccaaag ttcagctcaa agagattttg attaattctg
301 ggtttccaga agattgtttg ttgacacaag tgtttactaa cactggacca gataataatt
361 tggatgttgt tatctccctc ctggcctttg gtgtgtaccc caatgtatgc tatcataagg
421 aaaagaggaa gattctcacc actgaagggc gtaatgcact tatccacaaa tcatctgtta
481 attgtccttt tagtagccaa gacatgaagt acccatctcc cttctttgta tttggtgaaa
541 agattcgaac tcgagccatc tctgctaaag gcatgacttt agtcaccccc ctgcagttgc
601 ttctctttgc ctccaagaaa gtccaatctg atgggcagat tgtgcttgta gatgactgga
661 ttaaactgca aatatctcat gaagctgctg cctgtatcac tggtctccgg gcagccatgg
721 aggctttggt tgttgaagta accaaacaac ctgctatcat cagccagttg gaccccgtaa
781 atgaacgtat gctgaacatg atccgtcaga tctctagacc ctcagctgct ggtatcaacc
841 ttatgattgg cagtacacgg tatggagatg gtccacgtcc tcccaagatg gcccgatacg
901 acaatggaag cggatataga aggggaggtt ctagttacag tggtggaggc tatggcggtg
961 gctatagcag tggaggctat ggtagcggag gctatggtgg cagcgccaac tcctttcggg
1021 caggatatgg tgcaggtgtt ggtggaggct atagaggagt ttcccgaggt ggctttagag
1081 gcaactctgg aggagactac agagggccta gtggaggcta cagaggatct gggggattcc
1141 agcgaggagg tggtaggggg gcctatggaa ctggctactt tggacaggga agaggaggtg
1201 gcggctatta aaacttggtt atgtcagttc ctgtgtgtag acagtaagga aaaaaaggca
1261 tgctatgtgt tacgtgtttt ttccagtatg tttatttgcc accaaaaagt aaatgcattt
1321 tcacccattc tgtggttcat tgtagtttaa ggaaaccaag catatagatg cattagtgat
1381 tttgtttata ttatgtaaaa tataacgatc tcttaaaaat accacagttt gtattttttc
1441 tttaaggagt aaagatttgc ctttaaataa cttggtattt tcctggcttt cgtttaatac
1501 aatagaaaat aaagtattac accgaaaaaa aaaaaaaaaa aaa
//