LOCUS BC058894 2069 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens transcription factor 7-like 1 (T-cell specific,
HMG-box), mRNA (cDNA clone MGC:64931 IMAGE:6141641), complete cds.
ACCESSION BC058894
VERSION BC058894.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2069)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2069)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: l Column: 17.
FEATURES Location/Qualifiers
source 1..2069
/db_xref="H-InvDB:HIT000259904"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64931 IMAGE:6141641"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2069
/gene="TCF7L1"
/gene_synonym="TCF-3"
/db_xref="GeneID:83439"
/db_xref="HGNC:HGNC:11640"
/db_xref="MIM:604652"
CDS 238..2001
/gene="TCF7L1"
/gene_synonym="TCF-3"
/codon_start=1
/product="transcription factor 7-like 1 (T-cell specific,
HMG-box)"
/protein_id="AAH58894.1"
/db_xref="GeneID:83439"
/db_xref="HGNC:HGNC:11640"
/db_xref="MIM:604652"
/translation="MPQLGGGGGGGGGSGGGGGSSAGAAGGGDDLGANDELIPFQDEG
GEEQEPSSDSASAQRDLDEVKSSLVNESENQSSSSDSEAERRPQPVRDTFQKPRDYFA
EVRRPQDSAFFKGPPYPGYPFLMIPDLSSPYLSNGPLSPGGARTYLQMKWPLLDVPSS
ATVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPGSPPTHLSPEIDPKT
GIPRPPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQPMYSLPPGGFRHPYPALAMN
ASMSSLVSSRFSPHMVAPAHPGLPTSGIPHPAIVSPIVKQEPAPPSLSPAVSVKSPVT
VKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQILGRKWHNLSREEQA
KYYELARKERQLHSQLYPTWSARDNYGKKKKRKREKQLSQTQSQQQVQEAEGALASKS
KKPCVQYLPPEKPCDSPASSHGSMLDSPATPSAALASPAAPAATHSEQAQPLSLTTKP
ETRAQLALHSAAFLSAKAAASSSRQMGSQPPLLSRPLPLGSMPTALLASPPSFPATLH
AHQALPVLQAQPLSLVTKSAH"
BASE COUNT 404 a 780 c 576 g 309 t
ORIGIN
1 cccacgcgtc cgggggagcc ctaggctcgg cgctgccgga ggggcccgag ccgagccgcc
61 tgcgccccgg ccgggcagcg ccgggcccgc ttcccgcggg gccacgccct gtcaaacttt
121 gttgcggcgg ctagcgcagc gggcccgcaa gcgggcggga ggggcgccgg gccgggccgg
181 gcagggcgcg ggcggctagg ggctccgaga gcggcggccc cggcccgcgg ccccaccatg
241 ccccagctcg gcggcggggg cggcggcggc ggcggcagcg ggggaggcgg cggctccagc
301 gccggggcgg ccggcggagg ggacgacctc ggggcgaacg acgagctgat ccccttccag
361 gacgaggggg gcgaggagca ggagccgagc agcgatagcg cctcggcgca gcgggaccta
421 gacgaggtca agtcgtccct ggtcaacgag tcggagaacc agagcagcag ctcggactcg
481 gaggcggaga ggcgcccgca gcccgtccgg gacactttcc agaagccgcg ggactatttc
541 gccgaagtga gaaggcctca ggacagcgcg ttctttaaag gacccccgta ccctgggtac
601 cccttcctga tgatcccgga cctgagcagc ccgtacctct ccaacggacc cctgtctccc
661 ggaggagcgc gcacctacct gcagatgaaa tggcccctcc tcgatgtccc ctccagcgcc
721 acagtcaagg acacgaggtc accatctcca gcacacttgt ctaataaagt tcctgtcgtt
781 cagcacccgc atcacatgca tccgctgact cccctcatca cctacagcaa tgaccacttc
841 tcccccggct cccctcccac ccacctctcc ccagagatcg atccaaagac aggaatcccc
901 cggccccctc acccatccga gctgtcaccg tattacccac tctctcccgg agctgtcgga
961 caaatccccc accccctcgg ctggctcgtc ccacagcaag gccagcccat gtactccctt
1021 cctcccggtg gcttccggca cccttacccc gccctcgcca tgaacgcctc gatgtccagc
1081 ctggtctcca gtcggttctc tcctcacatg gtggctcctg cccaccctgg cctgcccacc
1141 tcagggatcc cccaccctgc catcgtctcc cccatcgtca agcaggaacc ggcacccccc
1201 agcctgagcc ctgcagtgag cgtgaaatca ccagtcaccg tgaaaaagga ggaggaaaag
1261 aagccccacg tgaagaagcc tctgaatgcc ttcatgttgt atatgaagga gatgagggcc
1321 aaggtggtgg ctgagtgcac cctgaaggaa agtgcagcca ttaaccagat ccttggaaga
1381 aagtggcaca acctgtctcg agaagaacag gccaagtact acgagctggc ccggaaggag
1441 cggcagcttc actcgcagct ctacccaacc tggtcagccc gggacaacta tggtaagaaa
1501 aagaagagga agagagaaaa gcagctgtcc cagacacagt cacagcagca agtccaggag
1561 gcagagggtg ccctggcctc caagagcaag aagccatgtg ttcagtacct gccccccgag
1621 aagccctgtg acagccctgc ctcctcccac gggagcatgc tggactcccc ggccactccc
1681 tctgcagctt tggcctcacc agctgcccct gctgccaccc attcggagca agcccagccc
1741 ctctccctca ccaccaaacc agaaacccgg gcccagctgg ctctccactc tgccgccttc
1801 ctgtcggcta aggctgcagc ctcctcctct aggcagatgg gcagccagcc tcccctcctg
1861 tcccggcccc tcccccttgg gtccatgccc acagctctgc tggcctctcc cccgtccttc
1921 cccgccacgc tccatgccca ccaggccctc ccggtgctac aggcccagcc tctttccctg
1981 gtcaccaagt ctgcccacta agctcccccc gacccctgca ggctgtcaca tgactcattg
2041 agtagtaatg attcaaaaaa aaaaaaaaa
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