LOCUS BC058883 1541 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dehydrogenase/reductase (SDR family) member 9, mRNA
(cDNA clone MGC:64824 IMAGE:5168747), complete cds.
ACCESSION BC058883
VERSION BC058883.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1541)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1541)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40548396.
FEATURES Location/Qualifiers
source 1..1541
/db_xref="H-InvDB:HIT000259893"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64824 IMAGE:5168747"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1541
/gene="DHRS9"
/gene_synonym="3alpha-HSD"
/gene_synonym="RDH15"
/gene_synonym="RDHL"
/gene_synonym="RETSDR8"
/db_xref="GeneID:10170"
/db_xref="HGNC:HGNC:16888"
CDS 111..1070
/gene="DHRS9"
/gene_synonym="3alpha-HSD"
/gene_synonym="RDH15"
/gene_synonym="RDHL"
/gene_synonym="RETSDR8"
/codon_start=1
/product="dehydrogenase/reductase (SDR family) member 9"
/protein_id="AAH58883.1"
/db_xref="GeneID:10170"
/db_xref="HGNC:HGNC:16888"
/translation="MLFWVLGLLILCGFLWTRKGKLKIEDITDKYIFITGCDSGFGNL
AARTFDKKGFHVIAACLTESGSTALKAETSERLRTVLLDVTDPENVKRTAQWVKNQVG
EKGLWGLINNAGVPGVLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQGRVI
NVSSVGGRLAIVGGGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNLADPVK
VIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKSYVNMDLSPVVECMDHALTSLF
PKTHYAAGKDAKIFWIPLSHMPAALQDFLLLKQKAELANPKAV"
BASE COUNT 492 a 319 c 333 g 397 t
ORIGIN
1 agctgagcaa gtccaccaac agtttctgtg tcccacttca tctttaataa ggacaccatc
61 ttcttgtatt atacaagaaa ggagtgtacc tatcacacac agggggaaaa atgctctttt
121 gggtgctagg cctcctaatc ctctgtggtt ttctgtggac tcgtaaagga aaactaaaga
181 ttgaagacat cactgataag tacattttta tcactggatg tgactcgggc tttggaaact
241 tggcagccag aacttttgat aaaaagggat ttcatgtaat cgctgcctgt ctgactgaat
301 caggatcaac agctttaaag gcagaaacct cagagagact tcgtactgtg cttctggatg
361 tgaccgaccc agagaatgtc aagaggactg cccagtgggt gaagaaccaa gttggggaga
421 aaggtctctg gggtctgatc aataatgctg gtgttcccgg cgtgctggct cccactgact
481 ggctgacact agaggactac agagaaccta ttgaagtgaa cctgtttgga ctcatcagtg
541 tgacactaaa tatgcttcct ttggtcaaga aagctcaagg gagagttatt aatgtctcca
601 gtgttggagg tcgccttgca atcgttggag ggggctatac tccatccaaa tatgcagtgg
661 aaggtttcaa tgacagctta agacgggaca tgaaagcttt tggtgtgcac gtctcatgca
721 ttgaaccagg attgttcaaa acaaacttgg cagatccagt aaaggtaatt gaaaaaaaac
781 tcgccatttg ggagcagctg tctccagaca tcaaacaaca atatggagaa ggttacattg
841 aaaaaagtct agacaaactg aaaggcaata aatcctatgt gaacatggac ctctctccgg
901 tggtagagtg catggaccac gctctaacaa gtctcttccc taagactcat tatgccgctg
961 gaaaagatgc caaaattttc tggatacctc tgtctcacat gccagcagct ttgcaagact
1021 ttttattgtt gaaacagaaa gcagagctgg ctaatcccaa ggcagtgtga ctcagctaac
1081 cacaaatgtc tcctccaggc tatgaaattg gccgatttca agaacacatc tccttttcaa
1141 ccccattcct tatctgctcc aacctggact catttagatc gtgcttattt ggattgcaaa
1201 agggagtccc accatcgctg gtggtatccc agggtccctg ctcaagtttt ctttgaaaag
1261 gagggctgga atggtacatc acataggcaa gtcctgccct gtatttaggc tttgcctgct
1321 tggtgtgatg taagggaaat tgaaagactt gcccattcaa aatgatcttt accgtggcct
1381 gccccatgct tatggtcccc agcatttaca gtaacttgtg aatgttaagt atcatctctt
1441 atctaaatat taaaagataa gtcaaacatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//