LOCUS BC058883 1541 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens dehydrogenase/reductase (SDR family) member 9, mRNA (cDNA clone MGC:64824 IMAGE:5168747), complete cds. ACCESSION BC058883 VERSION BC058883.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1541) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1541) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 119 Row: c Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40548396. FEATURES Location/Qualifiers source 1..1541 /db_xref="H-InvDB:HIT000259893" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:64824 IMAGE:5168747" /tissue_type="Brain, adult medulla" /clone_lib="NIH_MGC_119" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1541 /gene="DHRS9" /gene_synonym="3alpha-HSD" /gene_synonym="RDH15" /gene_synonym="RDHL" /gene_synonym="RETSDR8" /db_xref="GeneID:10170" /db_xref="HGNC:HGNC:16888" CDS 111..1070 /gene="DHRS9" /gene_synonym="3alpha-HSD" /gene_synonym="RDH15" /gene_synonym="RDHL" /gene_synonym="RETSDR8" /codon_start=1 /product="dehydrogenase/reductase (SDR family) member 9" /protein_id="AAH58883.1" /db_xref="GeneID:10170" /db_xref="HGNC:HGNC:16888" /translation="MLFWVLGLLILCGFLWTRKGKLKIEDITDKYIFITGCDSGFGNL AARTFDKKGFHVIAACLTESGSTALKAETSERLRTVLLDVTDPENVKRTAQWVKNQVG EKGLWGLINNAGVPGVLAPTDWLTLEDYREPIEVNLFGLISVTLNMLPLVKKAQGRVI NVSSVGGRLAIVGGGYTPSKYAVEGFNDSLRRDMKAFGVHVSCIEPGLFKTNLADPVK VIEKKLAIWEQLSPDIKQQYGEGYIEKSLDKLKGNKSYVNMDLSPVVECMDHALTSLF PKTHYAAGKDAKIFWIPLSHMPAALQDFLLLKQKAELANPKAV" BASE COUNT 492 a 319 c 333 g 397 t ORIGIN 1 agctgagcaa gtccaccaac agtttctgtg tcccacttca tctttaataa ggacaccatc 61 ttcttgtatt atacaagaaa ggagtgtacc tatcacacac agggggaaaa atgctctttt 121 gggtgctagg cctcctaatc ctctgtggtt ttctgtggac tcgtaaagga aaactaaaga 181 ttgaagacat cactgataag tacattttta tcactggatg tgactcgggc tttggaaact 241 tggcagccag aacttttgat aaaaagggat ttcatgtaat cgctgcctgt ctgactgaat 301 caggatcaac agctttaaag gcagaaacct cagagagact tcgtactgtg cttctggatg 361 tgaccgaccc agagaatgtc aagaggactg cccagtgggt gaagaaccaa gttggggaga 421 aaggtctctg gggtctgatc aataatgctg gtgttcccgg cgtgctggct cccactgact 481 ggctgacact agaggactac agagaaccta ttgaagtgaa cctgtttgga ctcatcagtg 541 tgacactaaa tatgcttcct ttggtcaaga aagctcaagg gagagttatt aatgtctcca 601 gtgttggagg tcgccttgca atcgttggag ggggctatac tccatccaaa tatgcagtgg 661 aaggtttcaa tgacagctta agacgggaca tgaaagcttt tggtgtgcac gtctcatgca 721 ttgaaccagg attgttcaaa acaaacttgg cagatccagt aaaggtaatt gaaaaaaaac 781 tcgccatttg ggagcagctg tctccagaca tcaaacaaca atatggagaa ggttacattg 841 aaaaaagtct agacaaactg aaaggcaata aatcctatgt gaacatggac ctctctccgg 901 tggtagagtg catggaccac gctctaacaa gtctcttccc taagactcat tatgccgctg 961 gaaaagatgc caaaattttc tggatacctc tgtctcacat gccagcagct ttgcaagact 1021 ttttattgtt gaaacagaaa gcagagctgg ctaatcccaa ggcagtgtga ctcagctaac 1081 cacaaatgtc tcctccaggc tatgaaattg gccgatttca agaacacatc tccttttcaa 1141 ccccattcct tatctgctcc aacctggact catttagatc gtgcttattt ggattgcaaa 1201 agggagtccc accatcgctg gtggtatccc agggtccctg ctcaagtttt ctttgaaaag 1261 gagggctgga atggtacatc acataggcaa gtcctgccct gtatttaggc tttgcctgct 1321 tggtgtgatg taagggaaat tgaaagactt gcccattcaa aatgatcttt accgtggcct 1381 gccccatgct tatggtcccc agcatttaca gtaacttgtg aatgttaagt atcatctctt 1441 atctaaatat taaaagataa gtcaaacatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a //