LOCUS BC058291 980 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tumor necrosis factor receptor superfamily, member 17,
mRNA (cDNA clone MGC:61811 IMAGE:6736094), complete cds.
ACCESSION BC058291
VERSION BC058291.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 980)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 980)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: n Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23238191.
FEATURES Location/Qualifiers
source 1..980
/db_xref="H-InvDB:HIT000259846"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61811 IMAGE:6736094"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_127"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..980
/gene="TNFRSF17"
/gene_synonym="BCM"
/gene_synonym="CD269"
/db_xref="GeneID:608"
/db_xref="HGNC:HGNC:11913"
/db_xref="MIM:109545"
CDS 142..696
/gene="TNFRSF17"
/gene_synonym="BCM"
/gene_synonym="CD269"
/codon_start=1
/product="tumor necrosis factor receptor superfamily,
member 17"
/protein_id="AAH58291.1"
/db_xref="GeneID:608"
/db_xref="HGNC:HGNC:11913"
/db_xref="MIM:109545"
/translation="MLQMAGQCSQNEYFDSLLHACIPCQLRCSSNTPPLTCQRYCNAS
VTNSVKGTNAILWTCLGLSLIISLAVFVLMFLLRKISSEPLEDEFKNTGSGLLGMANI
DLEKSRTGDEIILPRGLEYTVEECTCEDCIKSKPKVDSDHCFPLPAMEEGATILVTTK
TNDYCKSLPAALSATEIEKSISAR"
BASE COUNT 293 a 186 c 204 g 297 t
ORIGIN
1 ggggacccac gaagcaggcg aagttcattg ttctcaacat tctagctgct cttgctgcat
61 ttgctccgga attcttgtag agatattact tgtccttcca ggctgttctt tctgtagctc
121 ccttgttttc tttttgtgat catgttgcag atggctgggc agtgctccca aaatgaatat
181 tttgacagtt tgttgcatgc ttgcatacct tgtcaacttc gatgttcttc taatactcct
241 cctctaacat gtcagcgtta ttgtaatgca agtgtgacca attcagtgaa aggaacgaat
301 gcgattctct ggacctgttt gggactgagc ttaataattt ctttggcagt tttcgtgcta
361 atgtttttgc taaggaagat aagctctgaa ccattagagg acgagtttaa aaacacagga
421 tcaggtctcc tgggcatggc taacattgac ctggaaaaga gcaggactgg tgatgaaatt
481 attcttccga gaggcctcga gtacacggtg gaagaatgca cctgtgaaga ctgcatcaag
541 agcaaaccga aggtcgactc tgaccattgc tttccactcc cagctatgga ggaaggcgca
601 accattcttg tcaccacgaa aacgaatgac tattgcaaga gcctgccagc tgctttgagt
661 gctacggaga tagagaaatc aatttctgct aggtaattaa ccatttcgac tcgagcagtg
721 ccactttaaa aatcttttgt cagaatagat gatgtgtcag atctctttag gatgactgta
781 tttttcagtt gccgatacag ctttttgtcc tctaactgtg gaaactcttt atgttagata
841 tatttctcta ggttactgtt gggagcttaa tggtagaaac ttccttggtt tcatgattaa
901 agtctttttt tttcctgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa
//