LOCUS BC058009 1625 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens complement factor H-related 3, mRNA (cDNA clone
MGC:61905 IMAGE:4716505), complete cds.
ACCESSION BC058009
VERSION BC058009.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: f Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 54792786.
FEATURES Location/Qualifiers
source 1..1625
/db_xref="H-InvDB:HIT000259799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61905 IMAGE:4716505"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1625
/gene="CFHR3"
/gene_synonym="DOWN16"
/gene_synonym="FHR-3"
/gene_synonym="FHR3"
/gene_synonym="HLF4"
/db_xref="GeneID:10878"
/db_xref="HGNC:HGNC:16980"
/db_xref="MIM:605336"
CDS 46..1038
/gene="CFHR3"
/gene_synonym="DOWN16"
/gene_synonym="FHR-3"
/gene_synonym="FHR3"
/gene_synonym="HLF4"
/codon_start=1
/product="complement factor H-related 3"
/protein_id="AAH58009.1"
/db_xref="GeneID:10878"
/db_xref="HGNC:HGNC:16980"
/db_xref="MIM:605336"
/translation="MLLLINVILTLWVSCANGQVKPCDFPDIKHGGLFHENMRRPYFP
VAVGKYYSYYCDEHFETPSGSYWDYIHCTQNGWSPAVPCLRKCYFPYLENGYNQNYGR
KFVQGNSTEVACHPGYGLPKAQTTVTCTEKGWSPTPRCIRVRTCSKSDIEIENGFISE
SSSIYILNKEIQYKCKPGYATADGNSSGSITCLQNGWSAQPICINSSEKCGPPPPISN
GDTTSFLLKVYVPQSRVEYQCQPYYELQGSNYVTCSNGEWSEPPRCIHPCIITEENMN
KNNIKLKGRSDRKYYAKTGDTIEFMCKLGYNANTSILSFQAVCREGIVEYPRCE"
BASE COUNT 585 a 270 c 278 g 492 t
ORIGIN
1 gggaactgaa acttttgtat tagcatacta ctgagaatat ctaacatgtt gttactaatc
61 aatgtcattc tgaccttgtg ggtttcctgt gctaatggac aagtgaaacc ttgtgatttt
121 ccagacatta aacatggagg tctatttcat gagaatatgc gtagaccata ctttccagta
181 gctgtaggaa aatattactc ctattactgt gatgaacatt ttgagactcc ttcaggaagt
241 tactgggatt acattcattg cacacaaaat gggtggtcac cagcagtacc atgtctcaga
301 aaatgttatt ttccttattt ggaaaatgga tataatcaaa attatggaag aaagtttgta
361 cagggtaact ctacagaagt tgcctgccat cctggctacg gtcttccaaa agcgcagacc
421 acagttacat gtacggagaa aggctggtct cctactccca gatgcatccg tgtcagaaca
481 tgctcaaaat cagatataga aattgaaaat ggattcattt ccgaatcttc ctctatttat
541 attttaaata aagaaataca atataaatgt aaaccaggat atgcaacagc agatggaaat
601 tcttcaggat caattacatg tttgcaaaat ggatggtcag cacaaccaat ttgcattaat
661 tcttcagaaa agtgtgggcc tcctccacct attagcaatg gtgataccac ctcctttcta
721 ctaaaagtgt atgtgccaca gtcaagagtc gagtaccaat gccagcccta ctatgaactt
781 cagggttcta attatgtaac atgtagtaat ggagagtggt cggaaccacc aagatgcata
841 catccatgta taataactga agaaaacatg aataaaaata acataaagtt aaaaggaaga
901 agtgacagaa aatattatgc aaaaacaggg gataccattg aatttatgtg taaattggga
961 tataatgcaa atacatcaat tctatcattt caagcagtgt gtcgggaagg gatagtggaa
1021 taccccagat gcgaataagg cagcattgtt accctaaatg tatgtccaac ttccactttt
1081 ccacttctca ctcttatggt ctcaaagctt gcaaagatag cttctgatat tgttgtaatt
1141 tctactttat ttcaaagaaa attaatataa tagtttcaat ttgcaactta atatattctc
1201 aaaaatatat taaaacaaac taaattattg cttatgcttg tactaaaata ataaaaacta
1261 ctcttatatt ggacttctta tcaatgaatt agtaagtata gagacagaca gctgaatggc
1321 tttctgcata ttgtatagta tacctagaca tagaaacaaa atgactttag attttatttg
1381 gggaagtaat aataccataa aattagatat taaaattgta agtgaagata aacacactat
1441 agtattccct tattgtagcc atggtcctct agatgcagtt aaccaaatag ggtcattttt
1501 attaaaagta gtgtttcctg gcaaacactg acattacatc attatcatga tttaaaggaa
1561 atagtactag agaaggtgaa ttattatcat tttcctgtaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaa
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