LOCUS BC058003 1310 bp mRNA linear HUM 17-NOV-2006
DEFINITION Homo sapiens N-acetylneuraminate pyruvate lyase
(dihydrodipicolinate synthase), mRNA (cDNA clone MGC:61869
IMAGE:4607228), complete cds.
ACCESSION BC058003
VERSION BC058003.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1310)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1310)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: d Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13540532.
FEATURES Location/Qualifiers
source 1..1310
/db_xref="H-InvDB:HIT000259793"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61869 IMAGE:4607228"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1310
/gene="NPL"
/gene_synonym="c112"
/gene_synonym="NPL1"
/db_xref="GeneID:80896"
/db_xref="HGNC:HGNC:16781"
CDS 109..831
/gene="NPL"
/gene_synonym="c112"
/gene_synonym="NPL1"
/codon_start=1
/product="NPL protein"
/protein_id="AAH58003.1"
/db_xref="GeneID:80896"
/db_xref="HGNC:HGNC:16781"
/translation="MAFPKKKLQGLVAATITPMTENGEINFSVIGQYVDYLVKEQGVK
NIFVNGTTGEGLSLSVSERRQVAEEWVTKGKDKLDQVIIHVGALSLKESQELAQHAAE
IGADGIAVIAPFFLKPWTKDILINFLKEVAAAAPALPFYYYHIPALTGVKIRAEELLD
GILDKIPTFQGLKFSDTDLLDFGQCVDQNRQQQFAFLFGVDEFCIQRFINFVVKLENS
KLKVSKNQRTLPLGTTNFPFLH"
BASE COUNT 388 a 272 c 284 g 366 t
ORIGIN
1 ggggggagcg gctgcacgga caagagcgga ggcctggaag gggaaactga agcagaaaga
61 ggttacttaa tgggctcaag gtcacctacc tgacctacca gcagctcaat ggccttccca
121 aagaagaaac ttcagggtct tgtggctgca accatcacgc caatgactga gaatggagaa
181 atcaactttt cagtaattgg tcagtatgtg gattatcttg tgaaagaaca gggagtgaag
241 aacatttttg tgaatggcac aacaggagaa ggcctgtccc tgagcgtctc agagcgtcgc
301 caggttgcag aggagtgggt gacaaaaggg aaggacaagc tggatcaggt gataattcac
361 gtaggagcac tgagcttgaa ggagtcacag gaactggccc aacatgcagc agaaatagga
421 gctgatggca tcgctgtcat tgcaccgttc ttcctcaagc catggaccaa agatatcctg
481 attaatttcc taaaggaagt ggctgctgcc gcccctgccc tgccatttta ttactatcac
541 attcctgcct tgacaggggt aaagattcgt gctgaggagt tgttggatgg gattctggat
601 aagatcccca ccttccaagg gctgaaattc agtgatacag atctcttaga cttcgggcaa
661 tgtgttgatc agaatcgcca gcaacagttt gctttccttt ttggggtgga tgagttttgt
721 atccagagat ttatcaactt tgttgtcaaa ctagaaaact caaaactcaa agtttcaaag
781 aaccaaagga ctcttcctct gggcaccaca aacttcccct tcctccactg agaagactgt
841 ctctcccgca ggaccctgaa ttattgaaat cgaaggctga cttcctttct gcagtgagcc
901 caggggctaa tgttattatc ctgtcacact tgcaactagt gacttttgtt tagtgataga
961 agatttgggg aggacccaaa ggactcagaa ctttctctcc atacctcctt ttactctttt
1021 ctttctgtgt aatgtatcaa caactgttta atctcccttc taacaaacct tgatataagc
1081 tttctgatat caaagtatat tgacagttaa cccttactga ttttaaactt gactatccag
1141 tctgttaatt acctaagatt ttgttttcat ttcatctcta attgttttga tcattggcag
1201 agaaagagta tttgaaattc atatcagttt tgctccttat tttaatctct ttgaattaaa
1261 aataaaactt tttcaaaata gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//