LOCUS BC057837 1312 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens nuclear receptor 2C2-associated protein, mRNA (cDNA
clone MGC:71819 IMAGE:30345563), complete cds.
ACCESSION BC057837
VERSION BC057837.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1312)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1312)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 70980545.
FEATURES Location/Qualifiers
source 1..1312
/db_xref="H-InvDB:HIT000259773"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71819 IMAGE:30345563"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1312
/gene="NR2C2AP"
/gene_synonym="TRA16"
/db_xref="GeneID:126382"
/db_xref="HGNC:HGNC:30763"
/db_xref="MIM:608719"
CDS 349..768
/gene="NR2C2AP"
/gene_synonym="TRA16"
/codon_start=1
/product="nuclear receptor 2C2-associated protein"
/protein_id="AAH57837.1"
/db_xref="GeneID:126382"
/db_xref="HGNC:HGNC:30763"
/db_xref="MIM:608719"
/translation="MTHSLVCPETVSRVSSVLNRNTRQFGKKHLFDQDEETCWNSDQG
PSQWVTLEFPQLIRVSQLQIQFQGGFSSRRGCLEGSQGTQALHKIVDFYPEDNNSLQT
FPIPAAEVDRLKVTFEDATDFFGRVVIYHLRVLGEKV"
BASE COUNT 311 a 347 c 367 g 287 t
ORIGIN
1 aggggtccca agatttggct ccaagagcta ttcgcagaga aacagcctcg cacaaaaagc
61 caccgccccc gaaacccgcg ggaaatctgt ttcctgtgaa aggcctggcc tccgggcatt
121 ggcggtttcc ctgatcctct ctcccaaatt ttccggcagg ggattgatcg aggcgacatt
181 taggactggg gtgggcgagg gagtggcggt tctcgtccca agttacaggt gaggacgttc
241 aggccaaggc gtagccaaga tcgcgccgcc ctgtagcttg aggaggcgcc gggattcgaa
301 ccaaggctgt gcccaatcct aagccctgcg aggtcttgtg gaaccgacat gacccactct
361 ttggtttgtc cagagacagt gagcagggtg agttcagtgc tgaatcgcaa cactcggcag
421 tttggaaaaa aacatctttt cgaccaggat gaggagacat gttggaactc agaccagggc
481 ccctcccagt gggtgacgct ggagtttccc cagctcatcc gtgtctccca gctgcagatc
541 cagtttcagg gtggcttctc cagtcgccgg ggctgcctgg aaggttcaca gggcactcag
601 gctctccaca agattgtaga tttctaccct gaggacaaca actcgcttca gactttcccc
661 ataccagctg ctgaagtgga ccggctgaag gtgacgtttg aggatgccac tgactttttt
721 ggccgtgtgg tcatctacca cctgcgggtg cttggggaga aggtgtgaga cctctagggg
781 ctgtctcctc caggaagccc tccgggaagc acagcaaagt ccctcattct gcacagaagg
841 tttattggtt cctcttggga agggtcccct cccaccacct gtccagaagc tgcctttgaa
901 gtcagttctg ggtttcccca gctctggctg accattttgt tccctgagtg tctgagtccc
961 cggcaggcgg ccttcactca gggtcagcgg gcaccaggtt gctctggaag agcttgagga
1021 tgtggttctc gatcacctgt tgcactgaga tggggcaggg aaaaggtggg ctgtgagctt
1081 gaatcgggag tggggtggag gcacaggcca acctgcgctc tccccttagg ggacaaacag
1141 ggacccttgc agagacctgc attacagagc aaagctggga gaaccgagga ctcaccccag
1201 gaacctcaac ttcccctaag tttgtaaaaa tgcacttttg tagcttttca gaattaatat
1261 aaaaatattt cctaccaaaa aaaaaaaaaa aaaaacaaaa aaaaaaaaaa aa
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