LOCUS BC057828 823 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens profilin 1, mRNA (cDNA clone MGC:71801
IMAGE:30337970), complete cds.
ACCESSION BC057828
VERSION BC057828.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 823)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 823)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31745179.
FEATURES Location/Qualifiers
source 1..823
/db_xref="H-InvDB:HIT000259765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71801 IMAGE:30337970"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..823
/gene="PFN1"
/db_xref="GeneID:5216"
/db_xref="HGNC:HGNC:8881"
/db_xref="MIM:176610"
CDS 142..564
/gene="PFN1"
/codon_start=1
/product="profilin 1"
/protein_id="AAH57828.1"
/db_xref="GeneID:5216"
/db_xref="HGNC:HGNC:8881"
/db_xref="MIM:176610"
/translation="MAGWNAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVNIT
PAEVGVLVGKDRSSFYVNGLTLGGQKCSVIRDSLLQDGEFSMDLRTKSTGGAPTFNVT
VTKTDKTLVLLMGKEGVHGGLINKKCYEMASHLRRSQY"
BASE COUNT 179 a 259 c 214 g 171 t
ORIGIN
1 gctgcacagc gagcggagcc gcggtccgga cggcagcgcg tgccccgagc tctccgcctc
61 cccccgcccg ccagccgagg cagctcgagc ccagtccgcg gccccagcag cagcgccgag
121 agcagcccca gtagcagcgc catggccggg tggaacgcct acatcgacaa cctcatggcg
181 gacgggacct gtcaggacgc ggccatcgtg ggctacaagg actcgccctc cgtctgggcc
241 gccgtccccg ggaaaacgtt cgtcaacatc acgccagctg aggtgggtgt cctggttggc
301 aaagaccggt caagttttta cgtgaatggg ctgacacttg ggggccagaa atgttcggtg
361 atccgggact cactgctgca ggatggggaa tttagcatgg atcttcgtac caagagcacc
421 ggtggggccc ccaccttcaa tgtcactgtc accaagactg acaagacgct agtcctgctg
481 atgggcaaag aaggtgtcca cggtggtttg atcaacaaga aatgttatga aatggcctcc
541 caccttcggc gttcccagta ctgacctcgt ctgtcccttc cccttcaccg ctccccacag
601 ctttgcaccc ctttcctccc catacacaca caaaccattt tattttttgg gccattaccc
661 catacccctt attgctgcca aaaccacatg ggctgggggc cagggctgga tggacagaca
721 cctcccccta cccatatccc tcccgtgtgt ggttggaaaa cttttgtttt ttggggtttt
781 ttttttctga ataaaaaaga ttctactaaa aaaaaaaaaa aaa
//