LOCUS BC057827 2363 bp mRNA linear HUM 03-AUG-2005
DEFINITION Homo sapiens isopentenyl-diphosphate delta isomerase 1, mRNA (cDNA
clone MGC:71798 IMAGE:30337530), complete cds.
ACCESSION BC057827
VERSION BC057827.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2363)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2363)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2363
/db_xref="H-InvDB:HIT000259764"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71798 IMAGE:30337530"
/tissue_type="Placenta, pre-eclamptic"
/clone_lib="NIH_MGC_148"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2363
/gene="IDI1"
/gene_synonym="IPP1"
/gene_synonym="IPPI1"
/db_xref="GeneID:3422"
/db_xref="MIM:604055"
CDS 503..1189
/gene="IDI1"
/gene_synonym="IPP1"
/gene_synonym="IPPI1"
/codon_start=1
/product="IDI1 protein"
/protein_id="AAH57827.1"
/db_xref="GeneID:3422"
/db_xref="MIM:604055"
/translation="MMPEINTNHLDKQQVQLLAEMCILIDENDNKIGAETKKNCHLNE
NIEKGLLHRAFSVFLFNTENKLLLQQRSDAKITFPGCFTNTCCSHPLSNPAELEESDA
LGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRKNV
TLNPDPNEIKSYCYVSKEELKELLKKAASGEIKITPWFKIIAATFLFKWWDNLNHLNQ
FVDHEKIYRM"
BASE COUNT 705 a 453 c 536 g 669 t
ORIGIN
1 ggcttccgcc ccgcagcccc gaggggtctg ggcgcgctga agaccccttc ggctgctggg
61 ccaacgcccc cacccttggt cacctactcc tgccgccgag cggttcgcgg gaggtggcct
121 cgggggtcgt agctactcac cggcggggcg ctccgagtcc atctgccccg tagcccggca
181 gccggggcgg gagggctgcg agcccggggc gcggtccgcc tgaggcctga gacccggggc
241 cgcctgcgct cagggccgtg gtgccggccg cgcgggagcc tggcggggac ggcgcggtca
301 gtgttcggct cctccgcagt gactcaccag cgtcctgaag cttttgatca ccattggctg
361 ggaaggaaaa acagaatcag ctgttccctg cgaaaggtat catatgtttc ttacaaagtg
421 gaggtttgtg gcagccctgc atggagcaag tctgtcagca ccatctttct aacatgttct
481 agaacagatc agacattttg taatgatgcc tgaaataaac actaaccacc tcgacaagca
541 acaggttcaa ctcctggcag agatgtgtat ccttattgat gaaaatgaca ataaaattgg
601 agctgagacc aagaagaatt gtcacctgaa cgagaacatt gagaaaggat tattgcatcg
661 agcttttagt gtcttcttat tcaacaccga aaataagctt ctgctacagc aaagatcaga
721 tgctaagatt acctttccag gttgttttac gaatacgtgt tgtagtcatc cattaagcaa
781 tccagccgag cttgaggaaa gtgacgccct tggagtgagg cgagcagcac agagacggct
841 gaaagctgag ctaggaattc ccttggaaga ggttcctcca gaagaaatta attatttaac
901 acgaattcac tacaaagctc agtctgatgg tatctggggt gaacatgaaa ttgattacat
961 tttgttggtg aggaagaatg taactttgaa tccagatccc aatgagatta aaagctattg
1021 ttatgtgtca aaggaagaac taaaagaact tctgaaaaaa gcagccagtg gtgaaattaa
1081 gataacgcca tggtttaaaa ttattgcagc gacttttctc tttaaatggt gggataactt
1141 aaatcatttg aatcagtttg ttgaccatga gaaaatatac agaatgtgaa tatgtaggta
1201 aatgattaca gaaaaattta tctgcttaac aaacttagaa tgactttttc cttttaaatt
1261 tagttctatc attaatttat cattaaattt agttctatca tttggtacta tcattaatgt
1321 attatataca ctgatacttt aaaacttgtg tggaaaaaac taacttataa ttttgtatca
1381 cacaccctgg atatgtgttc tgtttctaag cgacatttgt gagagattat tgtaaaatga
1441 gagcgagcaa ataaaactta atttaatctt tgcagataca tacttatggg aaatttgaac
1501 aaatgagtga aactctgtgt ttttagtagg ctgtgataaa catttccgga gcacttgcag
1561 aggacttgct atttgccagg tgctttatgt atcattaaat ttttctcata gttcagaaaa
1621 atgtgcaaag gaaactattg tctcgctcct tcaaaacagt cttaattaac tttcatatta
1681 gcagattaaa ctagcagagc aggttcaagg gaaattaaat gatatggacc ctaatttgta
1741 tcattctgag ttgattgtgt ggtttattca ttctggaaac atgttgatac ttacagtcag
1801 ccactgcttt tgataagtga tattgattag gttgaatctt cttgtaaata gtatttacca
1861 gttagcaaag tctgtgtttt cagaattaca gtgagcacag aggtgttcat aaaatgggaa
1921 ttgagtccca ctcggtaaga gttgcttaaa cttgacactg ttgacatttg ggctggataa
1981 aacccctgtg gtggggtctg tgctgtgcat tgcaggatgg tgagcagcgt ccctctcatg
2041 tgacacccac agttatgccg gatgttgcca gatgccccta ggggacagag tcaaccccca
2101 actgaggacc actgtcctac agagtcagga aatattgtag ggagaaaaaa ataacaacaa
2161 caaaggcctg tgttaatgtt aaatagatga gattatggaa tgtgtatatt aatgttaaaa
2221 attgtacctt gatcaatgta ctttttataa acttgccata gatatctcag atttgaaacc
2281 tcaagacaga tttattattc ttaaatgctg tatgataatg aagaaaaata aaaatttatt
2341 tcttacaaaa aaaaaaaaaa aaa
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