LOCUS BC057818 839 bp mRNA linear HUM 29-JUL-2008
DEFINITION Homo sapiens chromosome 1 open reading frame 223, mRNA (cDNA clone
IMAGE:5269821), partial cds.
ACCESSION BC057818
VERSION BC057818.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 839)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 839)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene
prediction, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..839
/db_xref="H-InvDB:HIT000259755"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5269821"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene <1..839
/gene="C1orf223"
/db_xref="GeneID:374973"
/db_xref="HGNC:HGNC:29589"
CDS <1..702
/gene="C1orf223"
/codon_start=1
/product="C1orf223 protein"
/protein_id="AAH57818.1"
/db_xref="GeneID:374973"
/db_xref="HGNC:HGNC:29589"
/translation="RWADWLGRWVGEFPLPRAIGQVPKLSCMDSQQEDLRFPGMWVSL
YFGILGLCSVITGGCIIFLHWRKNLRREEHAQQWVEVMRAATFTYSPLLYWINKRRRY
GMNAAINTGPAPAVTKTETEVQNPDVLWELDIPEGRSHADQDSNPKAEAPAPLQPALQ
LAPQQPQARSPFPLPIFQEVPFAPPLCNLPPLLNHSVSYPLATCPERNVLFHSLLNLA
QEDHSFNVKPFPSEL"
BASE COUNT 200 a 239 c 219 g 181 t
ORIGIN
1 agatgggctg actggctggg cagatgggtg ggtgagttcc ctctccccag agccatcggc
61 caggtaccaa agctcagctg tatggattcc caacaggagg acctgcgctt ccctgggatg
121 tgggtctcat tgtactttgg aatcctgggg ctgtgttctg tgataactgg agggtgcatt
181 atctttctgc actggaggaa gaacttgagg cgggaagagc atgcccagca gtgggtggag
241 gtgatgagag ctgccacatt cacctacagc ccattgttgt actggattaa caagcgacgg
301 cgctacggca tgaatgcagc catcaacacg ggccctgccc ctgctgtcac caagactgag
361 actgaggtcc agaatccaga tgttctgtgg gagttggaca tccccgaagg caggagccat
421 gctgaccaag acagcaaccc caaggcggaa gcccctgctc ccctgcaacc tgcactgcag
481 ctggctccac agcagcccca ggccagatcc ccattcccac ttcccatctt tcaggaggtg
541 ccctttgccc cacccttgtg caacctaccc cccctgctga accactctgt ctcctatcct
601 ttggccacct gtcctgaaag gaatgttctc ttccattccc tcctgaatct ggcccaggaa
661 gaccatagct tcaatgtcaa gccttttcct tcagaactgt agcctcctct cactgaaggt
721 gggagctgca ggaatcaggt gcagagtagg aaatggaact aacctcagga aggtggtatt
781 gacagaggtc aggacccacc tggatgtcat gctatgaaac attaaaaaaa aaaaaaaaa
//