LOCUS BC057808 1721 bp mRNA linear HUM 21-JUL-2005
DEFINITION Homo sapiens hyaluronan and proteoglycan link protein 1, mRNA (cDNA
clone MGC:71729 IMAGE:30341037), complete cds.
ACCESSION BC057808
VERSION BC057808.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: e Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40254458.
FEATURES Location/Qualifiers
source 1..1721
/db_xref="H-InvDB:HIT000259745"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71729 IMAGE:30341037"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1721
/gene="HAPLN1"
/db_xref="GeneID:1404"
/db_xref="MIM:115435"
CDS 72..1136
/gene="HAPLN1"
/codon_start=1
/product="HAPLN1 protein"
/protein_id="AAH57808.1"
/db_xref="GeneID:1404"
/db_xref="MIM:115435"
/translation="MKSLLLLVLISICWADHLSDNYTLDHDRAIHIQAENGPHLLVEA
EQAKVFSHRGGNVTLPCKFYRDPTAFGSGIHKIRIKWTKLTSDYLKEVDVFVSMGYHK
KTYGGYQGRVFLKGGSDSDASLVITDLTLEDYGRYKCEVIEGLEDDTVVVALDLQGVV
FPYFPRLGRYNLNFHEAQQACLDQDAVIASFDQLYDAWRGGLDWCNAGWLSDGSVQYP
ITKPREPCGGQNTVPGVRNYGFWDKDKSRYDVFCFTSNFNGRFYYLIHPTKLTYDVAV
QACLNDGAQIAKVGQIFAAWKILGYDRCDAGWLADGSVRYPISRPRRRCSPTEAAVRF
VGFPDKKHKLYGVYCFRAYN"
BASE COUNT 508 a 350 c 382 g 481 t
ORIGIN
1 gggttccaaa tctcacaagc ctctttgtat gtgatgctct cgcagtgaag aagattcttt
61 gggctataaa gatgaagagt ctacttcttc tggtgctgat ttcaatctgc tgggctgatc
121 atctttcaga caactatact ctggatcatg acagagctat tcacatccaa gcagaaaatg
181 gcccccatct acttgtggaa gcagagcaag ccaaggtgtt ttcacacaga ggtggcaatg
241 ttacactgcc atgtaaattt tatcgagacc ctacagcatt tggctcagga atccataaaa
301 tccgaattaa gtggaccaag ctaacttcgg attacctcaa ggaagtggat gtttttgttt
361 ccatgggata ccacaaaaaa acctatggag gctaccaggg tagagtgttt ctgaagggag
421 gcagtgatag tgatgcttct ctggtcatca cagacctcac tctggaagat tatgggagat
481 ataagtgtga ggtgattgaa ggattagaag atgatactgt tgtggtagca ctggacttac
541 aaggtgtggt attcccttac tttccacgac tggggcgcta caatctcaat tttcacgagg
601 cgcagcaggc gtgtctggac caggatgctg tgatcgcctc cttcgaccag ctgtacgacg
661 cctggcgggg cgggctggac tggtgcaatg ccggctggct cagtgatggc tctgtgcaat
721 atcccatcac aaagcccaga gagccctgtg ggggccagaa cacagtgccc ggagtcagga
781 actacggatt ttgggataaa gataaaagca gatatgatgt tttctgtttt acatccaatt
841 tcaatggccg tttttactat ctgatccacc ccaccaaact gacctatgat gtagcggtgc
901 aagcttgtct caatgatggt gctcagattg caaaagtggg ccagatattt gctgcctgga
961 aaattctcgg atatgaccgc tgtgatgcgg gctggttggc ggatggcagc gtccgctacc
1021 ccatctctag gccaagaagg cgctgcagtc ctactgaggc tgcagtgcgc ttcgtgggtt
1081 tcccagataa aaagcataag ctgtatggtg tctactgctt cagagcatac aactgaatgt
1141 gcccttagag cgcatcagtt ttaaagtcat taagaacatg tgaaaggtgt tttttttttc
1201 caatatgaac tcatgcaagt taccaaaact gtgataaccc ttttttactt actgtaaaga
1261 gtcattttca taaagatcaa ttcattgatt tgttttttgt aaagctatca ttcaatatat
1321 attataaatt aatataaatt taagggaagc tctatgtaag gagacttaga gccaaactgt
1381 ttaagctgta tcatcccaac aaagtatcct ttcatgaacg gggcatgcaa tagcttaaga
1441 attgctagga ttaaattaag gaaagtaaag ctactcagag cagcaggttc cacaagcaca
1501 aactttacac atttgtacaa ttttgaaatg cactacaata aacaaattag agcaacacat
1561 ttgaaataca ggcttcttta cataaactga gaggttatac aaaactcagt ttcacaaggg
1621 aacaatctat acctttctaa aagttaatat ttcaagtctc taataggcag aatattttac
1681 tctttaaaat cctgcctttc tgaccgaaaa aaaaaaaaaa a
//