LOCUS BC057807 878 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens complement factor D (adipsin), mRNA (cDNA clone
MGC:71727 IMAGE:5269709), complete cds.
ACCESSION BC057807
VERSION BC057807.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 878)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 878)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: n Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544238.
FEATURES Location/Qualifiers
source 1..878
/db_xref="H-InvDB:HIT000259744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71727 IMAGE:5269709"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..878
/gene="CFD"
/gene_synonym="ADN"
/db_xref="GeneID:1675"
/db_xref="HGNC:HGNC:2771"
/db_xref="MIM:134350"
CDS 31..792
/gene="CFD"
/gene_synonym="ADN"
/codon_start=1
/product="complement factor D (adipsin)"
/protein_id="AAH57807.1"
/db_xref="GeneID:1675"
/db_xref="HGNC:HGNC:2771"
/db_xref="MIM:134350"
/translation="MHSWERLAVLVLLGAAACAAPPRGRILGGREAEAHARPYMASVQ
LNGAHLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVP
HPDSQPDTIDHDLLLLQLSEKATLGPAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAG
RRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDSGGPLVCGGVL
EGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVLA"
BASE COUNT 147 a 304 c 306 g 121 t
ORIGIN
1 agtcggtgtc tcagccacag cggcttcacc atgcacagct gggagcgcct ggcagttctg
61 gtcctcctag gagcggccgc ctgcgcggcg ccgccccgtg gtcggatcct gggcggcaga
121 gaggccgagg cgcacgcgcg gccctacatg gcgtcggtgc agctgaacgg cgcgcacctg
181 tgcggcggcg tcctggtggc ggagcagtgg gtgctgagcg cggcgcactg cctggaggac
241 gcggccgacg ggaaggtgca ggttctcctg ggcgcgcact ccctgtcgca gccggagccc
301 tccaagcgcc tgtacgacgt gctccgcgca gtgccccacc cggacagcca gcccgacacc
361 atcgaccacg acctcctgct gctacagctg tcggagaagg ccacactggg ccctgctgtg
421 cgccccctgc cctggcagcg cgtggaccgc gacgtggcac cgggaactct ctgcgacgtg
481 gccggctggg gcatagtcaa ccacgcgggc cgccgcccgg acagcctgca gcacgtgctc
541 ttgccagtgc tggaccgcgc cacctgcaac cggcgcacgc accacgacgg cgccatcacc
601 gagcgcttga tgtgcgcgga gagcaatcgc cgggacagct gcaagggtga ctccgggggc
661 ccgctggtgt gcgggggcgt gctcgagggc gtggtcacct cgggctcgcg cgtttgcggc
721 aaccgcaaga agcccgggat ctacacccgc gtggcgagct atgcggcctg gatcgacagc
781 gtcctggcct agggtgccgg ggcctgaagg tcagggtcac ccaagcaaca aagtcccgag
841 cattgaagtc atccactcct gcaaaaaaaa aaaaaaaa
//