LOCUS BC057789 1693 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens dipeptidase 3, mRNA (cDNA clone MGC:71629
IMAGE:5297958), complete cds.
ACCESSION BC057789
VERSION BC057789.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1693)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1693)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11641272.
FEATURES Location/Qualifiers
source 1..1693
/db_xref="H-InvDB:HIT000259727"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71629 IMAGE:5297958"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1693
/gene="DPEP3"
/gene_synonym="MBD3"
/db_xref="GeneID:64180"
/db_xref="HGNC:HGNC:23029"
/db_xref="MIM:609926"
CDS 39..1577
/gene="DPEP3"
/gene_synonym="MBD3"
/codon_start=1
/product="dipeptidase 3"
/protein_id="AAH57789.1"
/db_xref="GeneID:64180"
/db_xref="HGNC:HGNC:23029"
/db_xref="MIM:609926"
/translation="MIRTPLSASAHRLLLPGSRGRPPRNMQPTGREGSRALSRRYLRR
LLLLLLLLLLRQPVTRAETTPGAPRALSLGSPSLFTTPGVPSALTTPGLTTPGTPKTL
DLRGRAQALMRSFPLVDGHNDLPQVLRQRYKNVLQDVNLRNFSHGQTSLDRLRDGLVG
AQFWSASVSCQSQDQTAVRLALEQIDLIHRMCASYSELELVTSAEGLNSSQKLACLIG
VEGGHSLDSSLSVLRSFYVLGVRYLTLTFTCSTPWAESSTKFRHHMYTNVSGLTSFGE
KVVEELNRLGMMIDLSYASDTLIRRVLEVSQAPVIFSHSAARAVCDNLLNVPDDILQL
LKKNGGIVMVTLSMGVLQCNLLANVSTVADHFDHIRAVIGSEFIGIGGNYDGTGRFPQ
GLEDVSTYPVLIEELLSRSWSEEELQGVLRGNLLRVFRQVEKVREESRAQSPVEAEFP
YGQLSTSCHSHLVPQNGHQATHLEVTKQPTNRVPWRSSNASPYLVPGLVAAATIPTFT
QWLC"
BASE COUNT 350 a 527 c 461 g 355 t
ORIGIN
1 gcgtgacttc aaccccctct tcgggaggct gggtcgtcat gatccggacc ccattgtcgg
61 cctctgccca tcgcctgctc ctcccaggct cccgcggccg acccccgcgc aacatgcagc
121 ccacgggccg cgagggttcc cgcgcgctca gccggcggta tctgcggcgt ctgctgctcc
181 tgctactgct gctgctgctg cggcagcccg taacccgcgc ggagaccacg ccgggcgccc
241 ccagagccct ctccctgggc tcccccagcc tcttcaccac gccgggtgtc cccagcgccc
301 tcactacccc aggcctcact acgccaggca cccccaaaac cctggacctt cggggtcgcg
361 cgcaggccct gatgcggagt ttcccactcg tggacggcca caatgacctg ccccaggtcc
421 tgagacagcg ttacaagaat gtgcttcagg atgttaacct gcgaaatttc agccatggtc
481 agaccagcct ggacaggctt agagacggcc tcgtgggtgc ccagttctgg tcagcctccg
541 tctcatgcca gtcccaggac cagactgccg tgcgcctcgc cctggagcag attgacctca
601 ttcaccgcat gtgtgcctcc tactctgaac tcgagcttgt gacctcagct gaaggtctga
661 acagctctca aaagctggcc tgcctcattg gcgtggaggg tggtcactca ctggacagca
721 gcctctctgt gctgcgcagt ttctatgtgc tgggggtgcg ctacctgaca cttaccttca
781 cctgcagtac accatgggca gagagttcca ccaagttcag acaccacatg tacaccaacg
841 tcagcggatt gacaagcttt ggtgagaaag tagtagagga gttgaaccgc ctgggcatga
901 tgatagattt gtcctatgca tcggacacct tgataagaag ggtcctggaa gtgtctcagg
961 ctcctgtgat cttctcccac tcagctgcca gagctgtgtg tgacaatttg ttgaatgttc
1021 ccgatgatat cctgcagctt ctgaagaaga acggtggcat cgtgatggtg acactgtcca
1081 tgggggtgct gcagtgcaac ctgcttgcta acgtgtccac tgtggcagat cactttgacc
1141 acatcagggc agtcattgga tctgagttca tcgggattgg tggaaattat gacgggactg
1201 gccggttccc tcaggggctg gaggatgtgt ccacataccc agtcctgata gaggagttgc
1261 tgagtcgtag ctggagcgag gaagagcttc aaggtgtcct tcgtggaaac ctgctgcggg
1321 tcttcagaca agtggaaaag gtgagagagg agagcagggc gcagagcccc gtggaggctg
1381 agtttccata tgggcaactg agcacatcct gccactccca cctcgtgcct cagaatggac
1441 accaggctac tcatctggag gtgaccaagc agccaaccaa tcgggtcccc tggaggtcct
1501 caaatgcctc cccatacctt gttccaggcc ttgtggctgc tgccaccatc ccaaccttca
1561 cccagtggct ctgctgacac agtcggtccc cgcagaggtc actgtggcaa agcctcacaa
1621 agccccctct cctagttcat tcacaagcat atgctgagaa taaacatgtt acacatgaaa
1681 aaaaaaaaaa aaa
//