LOCUS BC057786 2199 bp mRNA linear HUM 01-SEP-2006 DEFINITION Homo sapiens podocan-like 1, mRNA (cDNA clone MGC:71618 IMAGE:30347370), complete cds. ACCESSION BC057786 VERSION BC057786.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2199) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2199) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: j Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 40254970. FEATURES Location/Qualifiers source 1..2199 /db_xref="H-InvDB:HIT000259724" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71618 IMAGE:30347370" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2199 /gene="PODNL1" /gene_synonym="FLJ23447" /gene_synonym="SLRR5B" /db_xref="GeneID:79883" /db_xref="HGNC:HGNC:26275" CDS 275..1813 /gene="PODNL1" /gene_synonym="FLJ23447" /gene_synonym="SLRR5B" /codon_start=1 /product="podocan-like 1" /protein_id="AAH57786.1" /db_xref="GeneID:79883" /db_xref="HGNC:HGNC:26275" /translation="MAESGLAMWPSLLLLLLLPGPPPVAGLEDAAFPHLGESLQPLLR ACPLRCSCPRVDTVDCDGLDLRVFPDNITRAAQHLSLQNNQLQELPYNELSRLSGLRT LNLHNNLISSEGLPDEAFESLTQLQHLCVAHNKLSVAPQFLPRSLRVADLAANQVMEI FPLTFGEKPALRSVYLHNNQLSNAGLPPDAFRGSEAIATLSLSNNQLSYLPPSLPPSL ERLHLQNNLISKVPRGALSRQTQLRELYLQHNQLTDSGLDATTFSKLHSLEYLDLSHN QLTTVPAGLPRTLAILHLGRNRIRQVEAARLHGARGLRYLLLQHNQLGSSGLPAGALR PLRGLHTLHLYGNGLDRVPPALPRRLRALVLPHNHVAALGARDLVATPGLTELNLAYN RLASARVHHRAFRRLRALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQLRMLEPEPLA GLDQLRELSLAHNRLRVGDIGPGTWHELQALQVRHRLVSHTVPRAPPSPCLPCHVPNI LVSW" BASE COUNT 432 a 757 c 642 g 368 t ORIGIN 1 aggctggctg aggttacgaa agcagagatg gggtggttgt tgggggggac caaggggacg 61 ggctggcctg tcctcaccac cccatccggc cgcctgcctg tcctccccag ggcggggaag 121 ggggtgggcc agctccccca aagcccgggg agaacaggct gttgtggggg gtggcatggg 181 tctggagatg gggggcggtg gtggccacag cagaggctcc aggaggtgac cgcctggttt 241 ccattaggaa gtcctggtca gcagcttggg cgagatggca gagtcagggc tggccatgtg 301 gccgagcctg ctgctgctcc tgctgttgcc ggggcccccg cccgtcgccg gcttggaaga 361 cgctgccttc ccccacctgg gggagagctt gcagcccctg ctccgggcct gtcccctgcg 421 ctgctcctgc ccccgagtcg acactgtgga ctgtgatggc ttggaccttc gagtgttccc 481 ggacaacatc accagagccg ctcagcacct ctccctgcag aacaaccagc tccaggaact 541 cccctacaat gagctgtccc gcctcagtgg cctgcgaacc ctcaacctcc acaacaacct 601 catctcctcc gaaggcctgc ctgacgaggc cttcgagtcc ctcacccagc tgcagcacct 661 ctgcgtggct cacaacaagc tctcagtggc ccctcagttt ctgccccggt ccctccgtgt 721 cgcggatctg gctgccaacc aagtgatgga gatcttcccc ctcacctttg gggagaagcc 781 ggcactcagg tccgtgtacc tccacaacaa ccagctgagc aacgctggcc tgccccccga 841 cgccttccgc ggctccgagg ccatcgccac cctcagcctc tccaacaacc agctcagcta 901 cctgccgccc agcctgccgc cctcactcga gcggctccac ctgcagaaca atctcatctc 961 caaggtgccc cgaggagccc tgagccgcca gactcaactc cgtgagctct acctccagca 1021 caaccagctg acagacagtg gcctggatgc caccaccttc agcaagctgc atagccttga 1081 atacctggat ctctcccaca accagctgac cacagtgccc gccggcctgc cccggaccct 1141 ggctatcctg cacctgggcc gcaaccgcat ccggcaggtg gaggcggctc ggctgcacgg 1201 ggcgcgtggt ctgcgctatt tgttgctgca gcacaaccag ctggggagct cagggctgcc 1261 cgccggggct ctgcggccgc tgcggggcct gcacacgctg cacctctatg gcaatgggct 1321 ggaccgcgtg cctccagccc tgccccgccg cctgcgtgcc ctggtgctgc cccacaacca 1381 cgtggccgcg ctgggtgccc gtgacctggt cgccacaccg ggcctgacgg agcttaacct 1441 ggcctataac cgcctggcca gcgcccgtgt gcaccaccgg gccttccgcc ggctgcgtgc 1501 cctgcgcagc ctcgacctgg cagggaatca gctaacccgg ctgcccatgg gcctgcccac 1561 tggcctgcgc accctgcagc tgcaacgcaa ccagctgcgg atgctcgagc ccgagcctct 1621 ggccggcctg gaccaactgc gggagctcag cctggcgcac aaccggctcc gggtcggcga 1681 catcgggcca ggcacctggc atgagctcca agccctccag gtcaggcaca ggctggttag 1741 ccacactgtc cccagggccc ctccatcccc ctgcctgccc tgccacgtcc caaacattct 1801 agttagctgg taaagcaatc agaacaagaa aatgataaga gtgggttaga aggtgatgag 1861 gaggctgggt gaggtggctc atgcctgtaa tcccagcact ttggggagcc aaggcaggag 1921 aatcgcttta ggctatgggt ttgagaccag cctggcaaca cagcaagacc ctatctctac 1981 caaaaaaaca tagccaagcg tggtggcaca tgcctgtagt cccagctatt caggaggctg 2041 aggcaggagg atcgcttgag cccagaagtt tgaggctgca atgagccgtg atcgggccac 2101 tgccctctag actgggcaac agagcaagac cctgtctctt gaaaaaaaaa gtgatgaaag 2161 aggtaaaaaa aaaaaaaaaa aaagaaaaaa aaaaaaaaa //