LOCUS BC057780 2224 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens solute carrier family 5 (sodium/glucose
cotransporter), member 11, mRNA (cDNA clone MGC:71585
IMAGE:5287366), complete cds.
ACCESSION BC057780
VERSION BC057780.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2224)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2224)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: o Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 17941284.
FEATURES Location/Qualifiers
source 1..2224
/db_xref="H-InvDB:HIT000259718"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71585 IMAGE:5287366"
/tissue_type="Brain, hypothalamus"
/clone_lib="NIH_MGC_96"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2224
/gene="SLC5A11"
/gene_synonym="KST1"
/gene_synonym="RKST1"
/gene_synonym="SGLT6"
/gene_synonym="SMIT2"
/db_xref="GeneID:115584"
CDS 284..2119
/gene="SLC5A11"
/gene_synonym="KST1"
/gene_synonym="RKST1"
/gene_synonym="SGLT6"
/gene_synonym="SMIT2"
/codon_start=1
/product="SLC5A11 protein"
/protein_id="AAH57780.1"
/db_xref="GeneID:115584"
/translation="MVWWPVGASLFASNVGSGHFIGLAGSGAATGISVSAYELNGLFS
VLMLAWIFLPIYIAGQVTTMPEYLRKRFGGIRIPIILAVLYLFIYIFTKISVDMYAGA
IFIQQSLHLDLYLAIVGLLAITAVYTVAGGLAAVIYTDALQTLIMLIGALTLMGYSFA
AVGGMEGLKEKYFLALASNRSENSSCGLPREDAFHIFRDPLTSDLPWPGVLFGMSIPS
LWYWCTDQVIVQRTLAAKNLSHAKGGALMAAYLKVLPLFIMVFPGMVSRILFPDQVAC
ADPEICQKICSNPSGCSDIAYPKLVLELLPTGLRGLMMAVMVAALMSSLTSIFNSAST
IFTMDLWNHLRPRASEKELMIVGRVFVLLLVLVSILWIPVVQASQGGQLFIYIRSISS
YLQPPVAVVFIMGCFWKRTNEKGAFWGLISGLLLGLVRLVLDFIYVQPRCDQPDERPV
LVKSIHYLYFSMILSTVTLITVSTVSWFTEPPSKEMVSHLTWFTRHDPVVQKEQAPPA
APLSLTLSQNGMPEASSSSSVQFEMVQENTSKTHSCDMTPKQSKVVKAILWLCGIQEK
GKEELPARAEAIIVSLEENPLVKTLLDVNLIFCVSCAIFIWGYFA"
BASE COUNT 469 a 619 c 598 g 538 t
ORIGIN
1 gggcacagtg gaagactggc tgaggctgga gtttggagtt tgacccgctt ggaggctctc
61 tcagcagcgg gcatatagga ggaagggtca ctgctgtctc cggaagctct tggctgcaaa
121 gagagaggat cccgggtatc tccctcctta caaccaccgc cacctcctag tgccttagaa
181 gccactgaca gcccccgggg caggtgagcc ctgcatctgg aataagtcca cagtgaagac
241 caaaagagac acagtgaaag gctacttcct ggctggaggg gacatggtgt ggtggccagt
301 gggtgcatcc ttgtttgcca gcaatgttgg aagtggacat ttcattggcc tggcagggtc
361 aggtgctgct acgggcattt ctgtatcagc ttatgaactt aatggcttgt tttctgtgct
421 gatgttggcc tggatcttcc tacccatcta cattgctggt caggtcacca cgatgccaga
481 atacctacgg aagcgcttcg gtggcatcag aatccccatc atcctggctg tactctacct
541 atttatctac atcttcacca agatctcggt agacatgtat gcaggtgcca tcttcatcca
601 gcagtctttg cacctggatc tgtacctggc catagttggg ctactggcca tcactgctgt
661 atacacggtt gctggtggcc tggctgctgt gatctacacg gatgccctgc agacgctgat
721 catgcttata ggagcgctca ccttgatggg ctacagtttc gccgcggttg gtgggatgga
781 aggactgaag gagaagtact tcttggccct ggctagcaac cggagtgaga acagcagctg
841 cgggctgccc cgggaagatg ccttccatat tttccgagat ccgctgacat ctgatctccc
901 gtggccgggg gtcctatttg gaatgtccat cccatccctc tggtactggt gcacggatca
961 ggtgattgtc cagcggactc tggctgccaa gaacctgtcc catgccaaag gaggtgctct
1021 gatggctgca tacctgaagg tgctgcccct cttcataatg gtgttccctg ggatggtcag
1081 ccgcatcctc ttcccagatc aagtggcctg tgcagatcca gagatctgcc agaagatctg
1141 cagcaacccc tcaggctgtt cggacattgc gtatcccaaa ctcgtgctgg aactcctgcc
1201 cacagggctc cgtgggctga tgatggctgt gatggtggcg gctctcatgt cctccctcac
1261 ctccatcttt aacagtgcca gcaccatctt caccatggac ctctggaatc acctccggcc
1321 tcgggcatct gagaaggagc tcatgattgt gggcagggtg tttgtgctgc tgctggtcct
1381 ggtctccatc ctctggatcc ctgtggtcca ggccagccag ggcggccagc tcttcatcta
1441 tatccggtcc atcagctcct acctgcagcc gcctgtggcg gtggtcttca tcatgggatg
1501 tttctggaag aggaccaatg aaaagggtgc cttctggggc ctgatctcgg gcctgctcct
1561 gggcttggtt aggctggtcc tggactttat ttacgtgcag cctcgatgcg accagccaga
1621 tgagcgcccg gtcctggtga agagcattca ctacctctac ttctccatga tcctgtccac
1681 ggtcaccctc atcactgtct ccaccgtgag ctggttcaca gagccaccct ccaaggagat
1741 ggtcagccac ctgacctggt ttactcgtca cgaccccgtg gtccagaagg aacaagcacc
1801 accagcagct cccttgtctc ttaccctctc tcagaacggg atgccagagg ccagcagcag
1861 cagcagcgtc cagttcgaga tggttcaaga aaacacgtct aaaacccaca gctgtgacat
1921 gaccccaaag cagtccaaag tggtgaaggc catcctgtgg ctctgtggaa tacaggagaa
1981 gggcaaggaa gagctcccgg ccagagcaga agccatcata gtttccctgg aagaaaaccc
2041 cttggtgaag accctcctgg acgtcaacct cattttctgc gtgagctgcg ccatctttat
2101 ctggggctat tttgcttagt gtggggtgaa cccaggggtc caaactctgt ttctcttcag
2161 tgctccattt ttttaatgaa agaaaaaata ataaagcttt tgtttaccaa aaaaaaaaaa
2221 aaaa
//