LOCUS BC057778 1953 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens G protein-coupled receptor 78, mRNA (cDNA clone
MGC:71582 IMAGE:30343110), complete cds.
ACCESSION BC057778
VERSION BC057778.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1953)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1953)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 133 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 36951033.
FEATURES Location/Qualifiers
source 1..1953
/db_xref="H-InvDB:HIT000259716"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:71582 IMAGE:30343110"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1953
/gene="GPR78"
/db_xref="GeneID:27201"
/db_xref="HGNC:HGNC:4528"
/db_xref="MIM:606921"
CDS 418..1509
/gene="GPR78"
/codon_start=1
/product="G protein-coupled receptor 78"
/protein_id="AAH57778.1"
/db_xref="GeneID:27201"
/db_xref="HGNC:HGNC:4528"
/db_xref="MIM:606921"
/translation="MGPGEALLAGLLVMVLAVALLSNALVLLCCAYSAELRTRASGVL
LVNLSLGHLLLAALDMPFTLLGVMRGRTPSAPGACQVIGFLDTFLASNAALSVAALSA
DQWLAVGFPLRYAGRLRPRYAGLLLGCAWGQSLAFSGAALGCSWLGYSSAFASCSLRL
PPEPERPRFAAFTATLHAVGFVLPLAVLCLTSLQVHRVARRHCQRMDTVTMKALALLA
DLHPSVRQRCLIQQKRRRHRATRKIGIAIATFLICFAPYVMTRLAELVPFVTVNAQWG
ILSKCLTYSKAVADPFTYSLLRRPFRQVLAGMVHRLLKRTPRPASTHDSSLDVAGMVH
QLLKRTPRPASTHNGSVDTENDSCLQQTH"
BASE COUNT 308 a 670 c 612 g 363 t
ORIGIN
1 agaagcgcgc agagtcccat cctgccacgc cacgaggaga gaagaaggaa agatacagtg
61 ttaggaaaga gacctccctc gcccctacgc cccgcgcccc tgcgcctcgc ttcagcctca
121 ggacagtcct gccgggacgg tgagcgcatt cagcaccctg gacagcaccg cggttgcgct
181 gcctccaggg cggccccggg ctgctcctgc tccgcagagc tacgccctcc ccccgggtgc
241 cccggaccct gcacttgccg ccgctttcct cgcgctgctc tggaccttgc tagccggctc
301 tgcacctccc agaagccgtg ggcgcgccgc tcagctgctc catcgcctca ctttcccagg
361 ctcgcgcccg aagcagagcc atgagaaccc cagggtgcct ggcgagccgc tagcgccatg
421 ggccccggcg aggcgctgct ggcgggtctc ctggtgatgg tactggccgt ggcgctgcta
481 tccaacgcac tggtgctgct ttgttgcgcc tacagcgctg agctccgcac tcgagcctca
541 ggcgtcctcc tggtgaatct gtctctgggc cacctgctgc tggcggcgct ggacatgccc
601 ttcacgctgc tcggtgtgat gcgcgggcgg acaccgtcgg cgcccggcgc atgccaagtc
661 attggcttcc tggacacctt cctggcgtcc aacgcggcgc tgagcgtggc ggcgctgagc
721 gcagaccagt ggctggcagt gggcttccca ctgcgctacg ccggacgcct gcgaccgcgc
781 tatgccggcc tgctgctggg ctgtgcctgg ggacagtcgc tggccttctc aggcgctgca
841 cttggctgct cgtggcttgg ctacagcagc gccttcgcgt cctgttcgct gcgcctgccg
901 cccgagcctg agcgtccgcg cttcgcagcc ttcaccgcca cgctccatgc cgtgggcttc
961 gtgctgccgc tggcggtgct ctgcctcacc tcgctccagg tgcaccgggt ggcacgcaga
1021 cactgccagc gcatggacac cgtcaccatg aaggcgctcg cgctgctcgc cgacctgcac
1081 cccagtgtgc ggcagcgctg cctcatccag cagaagcggc gccgccaccg cgccaccagg
1141 aagattggca ttgctattgc gaccttcctc atctgctttg ccccgtatgt catgaccagg
1201 ctggcggagc tcgtgccctt cgtcaccgtg aacgcccagt ggggcatcct cagcaagtgc
1261 ctgacctaca gcaaggcggt ggccgacccg ttcacgtact ctctgctccg ccggccgttc
1321 cgccaagtcc tggccggcat ggtgcaccgg ctgctgaaga gaaccccgcg cccagcatcc
1381 acccatgaca gctctctgga tgtggccggc atggtgcacc agctgctgaa gagaaccccg
1441 cgcccagcgt ccacccacaa cggctctgtg gacacagaga atgattcctg cctgcagcag
1501 acacactgag ggcctggcag ggctcatcgc ccccaccttc taagaagccc tgtggaaagg
1561 gcactggccc tgccacagag atgccactgg ggacccccag acaccagtgg cttgactttg
1621 agctaaggct gaagtacagg aggaggagga ggagagggcc ggatgtgggt gtggacagca
1681 gtagtggcgg aggagagctc ggggctgggc tgcctggctg ctgggtggcc ccgggacagt
1741 ggcttttcct ctctgaacct tagcttcctc acccttgttc tggggtcatg gcgatgcttc
1801 gagacagtgg gtagggaagt gccctgtgtg gcatatggta ctcgtgggcg tgctataagt
1861 gactgctgtt catgtgggtg aggtggtcac tcttgctcag ggtctgttgt gcagcccaga
1921 tggacacctg tttctccaaa aaaaaaaaaa aaa
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