LOCUS BC057387 2729 bp mRNA linear HUM 30-DEC-2006
DEFINITION Homo sapiens LSM14B, SCD6 homolog B (S. cerevisiae), mRNA (cDNA
clone MGC:52030 IMAGE:5724236), complete cds.
ACCESSION BC057387
VERSION BC057387.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2729)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2729)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-SEP-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Invitrogen
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 98 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389608.
FEATURES Location/Qualifiers
source 1..2729
/db_xref="H-InvDB:HIT000259686"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:52030 IMAGE:5724236"
/tissue_type="Ovary, pooled from 3 adults"
/clone_lib="NIH_MGC_125"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2729
/gene="LSM14B"
/gene_synonym="bA11M20.3"
/gene_synonym="FT005"
/gene_synonym="LSM13"
/db_xref="GeneID:149986"
/db_xref="HGNC:HGNC:15887"
CDS 207..872
/gene="LSM14B"
/gene_synonym="bA11M20.3"
/gene_synonym="FT005"
/gene_synonym="LSM13"
/codon_start=1
/product="LSM14B protein"
/protein_id="AAH57387.1"
/db_xref="GeneID:149986"
/db_xref="HGNC:HGNC:15887"
/translation="MSGSSGTPYLGSKISLISKAQIRYEGILYTIDTDNSTVALAKVR
SFGTEDRPTDRPAPPREEIYEYIIFRGSDIKDITVCEPPKAQHTLPQDPAIVQSSLGS
ASASPFQPHVPYSPFRGMAPYGPLAASSLLSQQYAASLGLEKLVSPPASAAASSPSSS
PSPQPVSELDLSSEPQQLTAKGNSSLGELHAVLQTILRARGKAADRMTVAVADHLPSP
CSR"
BASE COUNT 593 a 734 c 690 g 712 t
ORIGIN
1 cctctcagag ccccagtcgc gcgccccttc ttggttcgct cggtgcccgc gcaggcccct
61 cgggcggtgg cgaggaggcg cccaggcgga ggcggcggcg ggcggaggag cgcaggagcg
121 ggcggccagg ccaccgcgcg gcggcggagc gggccgcggc ccggcgctcc ttccccaccg
181 cggcccgacg caccccggcc gccgccatga gcggctcctc aggcaccccg tatctgggca
241 gcaagatcag cctcatctcc aaggcgcaga tccgctacga gggcattctc tacaccatcg
301 acaccgacaa ctccaccgtg gcgctcgcca aagtgaggtc ctttggcact gaagaccgtc
361 ccacagatag gcctgcgccc cccagagagg agatttatga gtacatcatt ttccgaggaa
421 gtgacatcaa ggatatcact gtgtgtgaac ctccgaaagc tcagcacaca ctcccgcagg
481 atcccgccat tgttcagtct tccctgggtt ctgcctccgc ctcgcccttc cagccgcacg
541 tgccttacag ccctttccga gggatggcgc cctacggccc gctggcggcc agctccctgc
601 tcagccagca gtatgccgcc tccctgggtc tagagaagtt ggtaagccct ccagcctcag
661 ccgctgcttc cagccctagc tcttctccat ctccacagcc cgtttcagag cttgacttgt
721 cctcagagcc acagcagctc actgccaagg gtaacagcag tttgggagaa ctgcatgctg
781 tcttgcaaac cattctgaga gcgaggggta aagcagcaga cagaatgaca gtagctgtag
841 cagatcattt gccaagccca tgcagccgct gagctgcttg ttttgcttca gcatgtagtc
901 ctgattgatg aactctcagt gttaaagaag ggattacgaa gaatcagcgg agtagtttgt
961 tctctctccc tgggtccagg ttctctgttg acctgtacca tgactaccac atacgggaaa
1021 cttcactgtt cacagaaagt catttccctg gggtttttgc tgggtcctaa atgtgttcca
1081 gagtgctgca ggggggactc cccaaagcac ctgacatgcc tgttttgctc tttgatccgt
1141 gtggttcata gatcactcat tgaggggatt caaaattagg ggcttgggtg acagtcgcca
1201 actgtttggc caggtggaca gtatcagcct gatggccagc tggccagtgt acaccacctg
1261 tctctgtgct gtggtggtgg cggcacctgt ggggtttcta gatcttttct cacgttctac
1321 tcatttcccc tgaagttcta aaattcatat tgacgatctt gctgtatgtt tgtgttacac
1381 atagcaccct gacaagctga accatcgcca ttacccggcc ctggtccagg ttgatgcctg
1441 ggctttcctt atggcacaca gctgctgtca gtctgtcatt ctgcaggtgc tgctttccaa
1501 atcctgcatg cactctgtgt atctgagtta cagagtagtc tttttttttc ccccacttaa
1561 aaatgacaca gatacttcta ttgctcttag gatcagttac ctaaacctgc tcatagggca
1621 agactttgtt tgaactagtt ggttgtgtaa aaagcagaca agccccttat ccatgcccct
1681 gcagtcacag tatgatcagg aggcaggcag tgctgtgttt gtctcccgga catgctgagt
1741 gagacaatca gtgagaaagt ggcccgggtg cattcccgcc agaggacact ttccagacct
1801 ctatgcagag tcgttccaac ctgccctttg agagcttctc ttgatctggt tacaaggaat
1861 ttttctacag tcaatttttt ttttcatttc tattccgtaa aagcagtaag atgagatgcc
1921 cagtcttcat gtgtattggg ctgttcgtct aataataatt accctgtggt tagggtgcct
1981 tttctgtttc agatctctgt tcacttacac ccagtcccac attgtcctgt ttagagtccc
2041 tacaggtcct ggaaccttgg aaagggagga gatggagaga ggtgggtggt gcttcccatt
2101 ttcctcctgg ttcagagggc ctggtttctg agggttcatc ccctgtgcgt gggcctcgga
2161 ctgcagtttc ataggcacag ccccttgcca aaggctacct aggagccctt tgtgtcttca
2221 tgatgagcct ttgcccttga gagaagtgta ggctgctacg tctcggaagt cagctcctgc
2281 ttcatcattt ttagttttat tgtgccttaa gtggaaatga cagtgttgta gaatttaact
2341 tcagaatttg ttcactgcat tttctagaaa atcccaggct gggctggttc ttctccagtg
2401 tggaccagaa tgaaacaaat tctcagatcc tgaattcatc aggatcttgg ggctgctgag
2461 ctcctttggg attggagctt gtgtggtttt aagaaagctg tttccacact tctggggagg
2521 tgcctgtttg taggcacggt gtttttcctg tccttgaggt tccctaactt gggaagctca
2581 gggctttggg agtggggagt ccaaagatga actggccttg gtgctgcccc cctcttaata
2641 ctcaccaata aattctactt cctgtccacc taaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//