LOCUS BC056917 933 bp mRNA linear HUM 05-APR-2005
DEFINITION Homo sapiens apolipoprotein A-I binding protein, mRNA (cDNA clone
MGC:65189 IMAGE:3873464), complete cds.
ACCESSION BC056917
VERSION BC056917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 933)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 933)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: a Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21426826.
FEATURES Location/Qualifiers
source 1..933
/db_xref="H-InvDB:HIT000259642"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65189 IMAGE:3873464"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..933
/gene="APOA1BP"
/gene_synonym="AIBP"
/db_xref="GeneID:128240"
/db_xref="MIM:608862"
CDS 60..842
/gene="APOA1BP"
/gene_synonym="AIBP"
/codon_start=1
/product="APOA1BP protein"
/protein_id="AAH56917.1"
/db_xref="GeneID:128240"
/db_xref="MIM:608862"
/translation="MSRLRALLGLGLLVAGSRLPRIKSQTIACRSGPTWWGPQRLNSG
GRWDSEVMASTVVKYLSQEEAQAVDQELFNEYQFSVDQLMELAGLSCATAIAKAYPPT
SMSRSPPTVLVICGPGNNGGDGLVCARHLKLFGYEPTIYYPKRPNKPLFTALVTQCQK
MDIPFLGEMPAELQGRCSGTVPQHPECPEGTHCAHCQHRHSLRMGRGEGKCWRDPARL
AHLPHSPQKICNPVYRSLPLPGGSFCATCSGKEVPAEPATLP"
BASE COUNT 200 a 280 c 275 g 178 t
ORIGIN
1 cccacgcgtc cggccgggcc gggccgggcc gggccggggg cgcgcgctct gcgagctgga
61 tgtccaggct gcgggcgctg ctgggcctcg ggctgctggt tgcgggctcg cgcctgccgc
121 ggatcaaaag ccagaccatc gcctgtcgct cgggacccac ctggtgggga ccgcagcggc
181 tgaactcggg tggccgctgg gactcagagg tcatggcgag cacggtggtg aagtacctga
241 gccaggagga ggcccaggcc gtggaccagg agctatttaa cgaataccag ttcagcgtgg
301 accaacttat ggaactggcc gggctgagct gtgctacagc catcgccaag gcatatcccc
361 ccacgtccat gtccaggagc ccccctactg tcctggtcat ctgtggcccg gggaataatg
421 gaggagatgg tctggtctgt gctcgacacc tcaaactctt tggctacgag ccaaccatct
481 attaccccaa aaggcctaac aagcccctct tcactgcatt ggtgacccag tgtcagaaaa
541 tggacatccc tttccttggg gaaatgcccg cagagcttca agggcgatgt tcgggaaccg
601 ttccacagca tcctgagtgt cctgaaggga ctcactgtgc ccattgccag catcgacatt
661 ccctcaggat gggacgtgga gaagggaaat gctggaggga tccagccaga cttgctcatc
721 tccctcacag cccccaaaaa atctgcaacc cagtttaccg gtcgctacca ttacctgggg
781 ggtcgttttg tgccacctgc tctggaaaag aagtaccagc tgaacctgcc accctaccct
841 gacactgagt gtgtctatcg tctgcagtga gggaaggtgg gtgggtattc tccccaataa
901 agacttagag cccctctaaa aaaaaaaaaa aaa
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