LOCUS BC056888 1315 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hypothetical protein LOC51233, mRNA (cDNA clone
MGC:65026 IMAGE:5165160), complete cds.
ACCESSION BC056888
VERSION BC056888.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1315)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1315)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: c Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56118954.
FEATURES Location/Qualifiers
source 1..1315
/db_xref="H-InvDB:HIT000259613"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65026 IMAGE:5165160"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1315
/gene="LOC51233"
/db_xref="GeneID:51233"
CDS 278..967
/gene="LOC51233"
/codon_start=1
/product="hypothetical protein LOC51233"
/protein_id="AAH56888.1"
/db_xref="GeneID:51233"
/translation="MGNILTCCINSHCGWPRGKDAPCYESDTDIYETVAAATSESTTV
EPGKLDVGATEGQDLQHISNQKMPTGPPEDRLSLKFLPSSEEDNDDAKILPSPVQGSS
EDNLSLVCLPRSEDDDCDDDDDDDAQILPSRVQGGCYRFDSSSCSSEDNLSLVCLPRS
EDDDCDDDDDDAQILPSPVQACSEDSLFLRCSLRHKDEEEEDDDDIHITARIESDLTL
ESLSDEEIHPG"
BASE COUNT 362 a 294 c 354 g 305 t
ORIGIN
1 ggaggaggag ctccaactgt gctctttgat ggcagttttt gcacctttgg gtgcttgtca
61 tgttcgttta tttttcaaag aagacagcag gtccctgacc tcatagacca gctagtttgg
121 gaggtggcgg cagaataagg gctgaggacc cagatctgcc tggggtcagg ctgcttctaa
181 aagtgcaggg ccaccctcag tagtgtggct gctagggcag cacagttaca atttcgctga
241 aggctgagtc aggagtggag aggcatggag aggccccatg gggaatatac tgacctgttg
301 tatcaactcc cactgtggct ggcccagggg gaaggacgca ccctgttatg aatctgatac
361 tgatatttat gagactgtgg ctgctgcaac atcagaatcc actactgtag agcctggcaa
421 gctggatgtg ggagccacgg agggccaaga cctgcagcac atcagcaacc aaaagatgcc
481 cacaggtccc cctgaggacc gcctgagttt aaaatttctg ccatcaagtg aggaagacaa
541 tgatgatgcc aagattttac catcacctgt ccagggttct tctgaggaca acctgagttt
601 agtatgccta ccacgaagtg aagatgatga ctgtgatgat gatgatgatg atgatgccca
661 gattttaccg tcacgtgtcc agggtggctg ttaccggttt gatagcagtt cttgttcttc
721 tgaggacaac ctgagtttag tatgcctacc acgaagtgaa gatgatgact gtgatgatga
781 tgatgatgat gcccagattt taccgtcacc tgtccaggct tgttctgaag atagcctgtt
841 tttaagatgc tcactgagac acaaagatga agaagaagaa gatgatgatg acatccacat
901 aacagctcgg atagaaagtg acttgacgct ggagagtcta agtgatgaag agattcatcc
961 agggtgaagc ccttctgtgg agctgaccag ggtgctgacc caaagggcag gccagcgcgt
1021 gctgcagggt ccccagcttt gcccctggag gtctcaatcc tctctacatt ctgaggaaaa
1081 ctcttggtcc cagcagagag aaaaagtcca aggctgcttc ccacccaccg ccagcactag
1141 gtttggcctg taccatccag gacccagtgc ttctgggcct ggcatttctc ctttggcaag
1201 agagtgagaa gagacgtgac tgtgctccac gagcagaaag tgccattccc acttgaaata
1261 aagagactga gtgcatttaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//