LOCUS BC056882 1903 bp mRNA linear HUM 25-MAR-2004
DEFINITION Homo sapiens CUE domain containing 1, mRNA (cDNA clone MGC:65000
IMAGE:6150503), complete cds.
ACCESSION BC056882
VERSION BC056882.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1903)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1903)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: m Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923664.
FEATURES Location/Qualifiers
source 1..1903
/db_xref="H-InvDB:HIT000259607"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65000 IMAGE:6150503"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1903
/gene="CUEDC1"
/gene_synonym="FLJ20739"
/db_xref="GeneID:404093"
CDS 415..1575
/gene="CUEDC1"
/gene_synonym="FLJ20739"
/codon_start=1
/product="CUEDC1 protein"
/protein_id="AAH56882.1"
/db_xref="GeneID:404093"
/translation="MTSLFRRSSSGSGGGGTAGARGGGGGTAAPQELNNSRPARQVRR
LEFNQAMDDFKTMFPNMDYDIIECVLRANSGAVDATIDQLLQMNLEGGGSSGGVYEDS
SDSEDSIPPEILERTLEPDSSDEEPPPVYSPPAYHMHVFDRPYPLAPPTPPPRIDALG
SGAPTSQRRYRNWNPPLLGNLPDDFLRILPQQLDSIQGNAGGPKPGSGEGCPPAMAGP
GPGDQESRWKQYLEDERIALFLQNEEFMKELQRNRDFLLALERDRLKYESQKSKSSSV
AVGNDFGFSSPVPGTGDANPAVSEDALFRDKLKHMGKSTRRKLFELARAFSEKTKMRK
SKRKHLLKHQSLGAAASTANLLDDVEGHACDEDFRGRRQEAPKVEEGLREGQ"
misc_feature 550..678
/gene="CUEDC1"
/gene_synonym="FLJ20739"
/note="CUE; Region: Domain that may be involved in binding
ubiquitin-conjugating enzymes (UBCs)"
/db_xref="CDD:smart00546"
BASE COUNT 411 a 610 c 593 g 289 t
ORIGIN
1 ggccccgccg ccaccgctgc ggattgcagc ccctcccccg cccggcccgc ggcccggccc
61 ctgcggcccg cgcggagcgg acgcgcgtgg cgctgcccgg tgggaccatc cgtgaaaccg
121 gtgccaggat gcaccggggg tgtggatgac cggccgccca gccccagcac ggcccggtcc
181 cgcatgccac cgccccgcga ggaccgctct ccaagggctg cctggggccc cgcgcccgta
241 ctctcctaac ccggagctct tggcagccca ttgctgcctg gctacccggg gaggaggagg
301 cgcaggagtg agctgcccga gaccgcaggg caagtaagcg gctgacggcg gaaagaccct
361 ggggaagggg ctttgcggcc ggctagaaac attttcccca agcggctccg caaaatgacc
421 agcctgttcc gccggagcag cagcggcagc ggcgggggtg gcaccgccgg ggcacgcggg
481 ggcgggggag gcacggccgc cccccaggag ctcaacaaca gccggcctgc ccgccaggtg
541 cgccgcctgg agttcaacca ggccatggac gacttcaaga ccatgttccc caacatggat
601 tacgacatca tcgaatgcgt gctgcgcgcc aacagcggcg ctgtggacgc caccatcgac
661 cagctgctgc agatgaacct ggagggcggt ggcagcagcg gcggcgtcta tgaggacagc
721 tccgactcgg aggacagcat ccccccggag atcttggaaa ggactttgga acctgatagc
781 tcggatgaag agcccccacc tgtgtactcc ccgccagcct accacatgca cgtgttcgac
841 cggccctacc ctctggctcc cccgactccg cctccccgta tcgacgcgct gggctctgga
901 gcccctacaa gccagagacg ctatcggaac tggaacccac cactgctggg caaccttccg
961 gatgactttc tccgcatcct gccccagcag ctggacagca tacagggtaa cgctgggggc
1021 cccaagcctg ggagtggaga gggatgtcca cctgccatgg ctgggccagg gcccggagac
1081 caggagagcc gctggaagca gtacctggag gacgagagga tcgcgctttt cctgcagaac
1141 gaggagttca tgaaggagct gcaacggaac cgcgacttcc tcctcgctct ggagagagat
1201 cgattgaaat acgaatccca gaaatctaaa tccagcagcg tggctgtcgg aaacgacttt
1261 ggcttttcct ctcctgtccc aggaactggc gacgccaacc ccgctgtgtc tgaagatgcc
1321 ttattcaggg acaagctgaa acacatggga aagtccaccc ggaggaaact gtttgaactt
1381 gcccgagcct tctcagagaa gaccaaaatg aggaagtcaa agaggaaaca cttgttgaag
1441 catcagtcgc tgggggctgc cgcgtcaaca gccaacctcc tggatgatgt ggagggccac
1501 gcgtgtgatg aagacttccg gggcaggcgt caggaggcac ccaaggtgga ggaaggcctg
1561 cgagaaggac agtaagagat gccagcagct cttccttgcc agagatgatc tgacccggtg
1621 ggggcagctg gaaagcaaca ctggccccca gctgaagggc ccagctgcag ccagacagat
1681 ggtgcttgag aaccgaggcc cggtgatcct ccagccacag tccagcccaa ccactgccac
1741 tttccatggg acttagaact tcggagttgc tgccttgcaa ttggaggaag gacctggggc
1801 ccctataggc agcagccaat tacagcccct tttgtagcca ggcgttccta tggtcaaaga
1861 gtggaaatgc aggaaccaac ctccctttaa aaaaaaaaaa aaa
//