LOCUS BC056757 2155 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens solute carrier family 6, member 18, mRNA (cDNA clone MGC:50843 IMAGE:5758770), complete cds. ACCESSION BC056757 VERSION BC056757.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2155) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2155) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: i Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 32699071. FEATURES Location/Qualifiers source 1..2155 /db_xref="H-InvDB:HIT000259584" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:50843 IMAGE:5758770" /tissue_type="Colon, Kidney, Stomach, adult, whole pooled" /clone_lib="NIH_MGC_116" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2155 /gene="SLC6A18" /gene_synonym="FLJ31236" /gene_synonym="Xtrp2" /db_xref="GeneID:348932" /db_xref="HGNC:HGNC:26441" CDS 82..1968 /gene="SLC6A18" /gene_synonym="FLJ31236" /gene_synonym="Xtrp2" /codon_start=1 /product="solute carrier family 6, member 18" /protein_id="AAH56757.1" /db_xref="GeneID:348932" /db_xref="HGNC:HGNC:26441" /translation="MAHAPEPDPAACDLGDERPKWDNKAQYLLSCTGFAVGLGNIWRF PYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGVWTAISPYLSGVGL GCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRTGFVEECQGSSAVSY FWYRQTLNITADINDSGSIQWWLLICLAASWAVVYMCVIRGIETTGKVIYFTALFPYL VLTIFLIRGLTLPGATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFA SYNSPRNDCQKDAVVIALVNRMTSLYASIAVFSVLGFKATNDYEHCLDRNILSLINDF DFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTET DLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCL VCFLSATCFTLQSGNYWLEIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFCDDIAWMT GRRPSPYWRLTWRVVSPLLLTIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGW ARAACVLLSLLPVLWVPVAALAQLLTRRRRTWRDRDARPDTDMRPDTDTRPDTDMRPD TDMR" BASE COUNT 439 a 661 c 620 g 435 t ORIGIN 1 cagaggctgg agacggctct ctagtgctgg gtgtggagtg aggcaccacc cttgccctga 61 agcctggggc actcagtcac catggctcat gccccagaac cggacccggc cgcctgcgac 121 ctcggggatg agaggcccaa gtgggacaac aaggcccagt acctcctgag ctgcactggg 181 tttgccgtgg gactggggaa catttggcgg ttcccatacc tgtgccagac ctatggagga 241 ggggccttcc tcatccccta cgtcatcgcg ctggtcttcg aggggatccc cattttccac 301 gtcgagctcg ccatcggcca gcggctgcgg aagggcagcg tcggcgtgtg gacggccatc 361 tccccgtacc tcagtggagt agggctgggc tgtgtcacgc tgtccttcct gatcagcctg 421 tactacaaca ccatcgtggc gtgggtgctg tggtacctcc tcaactcctt ccagcacccg 481 ctgccctgga gctcctgccc accggacctc aacagaacag ggtttgtgga ggagtgccag 541 ggcagcagcg ccgtgagcta cttctggtac cggcagacac tgaacatcac agccgacatc 601 aatgacagtg gctccatcca gtggtggctg ctcatctgct tggcagcctc ctgggcagtc 661 gtgtacatgt gtgtcatcag gggcattgag actacaggga aggtgattta cttcacagct 721 ttgttccctt acctggtcct gaccatcttt ctcatcagag ggctgaccct gccaggggca 781 acaaaaggac tcatctactt gttcactccc aacatgcaca ttctccagaa cccccgggtg 841 tggctggacg cagccaccca gatattcttc tctctgtccc tggccttcgg aggacacatc 901 gcttttgcaa gttacaactc gcccaggaat gactgccaga aggatgcggt ggtcatcgcc 961 ctggtcaaca ggatgacctc cctgtacgcg tccatcgctg tcttctctgt cctggggttc 1021 aaagcaacta atgactacga gcactgcctg gacagaaaca tcctcagcct catcaacgac 1081 tttgacttcc cagagcagag catctccagg gacgactacc cagccgtcct catgcacctg 1141 aacgccacct ggcccaagag ggtggcccag ctccccctga aggcctgcct cctggaagac 1201 tttctggata agagtgcctc gggcccgggc ctggccttcg tcgtcttcac ggagaccgac 1261 ctccacatgc cgggggctcc tgtgtgggcc atgctcttct tcgggatgct gttcaccttg 1321 gggctatcga ccatgttcgg gaccgtggag gcggtcatca cacccctgct ggacgtgggg 1381 gtcctgccta gatgggtccc caaggaggcc ctgactgggc tggtctgcct ggtctgcttc 1441 ctctccgcca cctgcttcac gctgcagtct gggaactact ggctggagat tttcgacaat 1501 tttgccgctt ccccgaacct gctcatgttg gcctttctcg aggttgtggg tgtcgtttat 1561 gtttatggaa tgaaacggtt ctgcgatgac attgcgtgga tgaccgggag gcggcccagc 1621 ccctactggc ggctgacctg gagggtggtc agtcccctgc tgctgaccat ctttgtggct 1681 tacatcatcc tcctgttctg gaagccactg agatacaagg cctggaaccc caaatacgag 1741 ctgttcccct cgcgtcagga gaagctctac ccgggctggg cgcgcgccgc ctgtgtgctg 1801 ctgtccttgc tgcccgtgct gtgggtcccg gtggccgcgc ttgctcagct gctcacccgg 1861 cggaggcgga cgtggaggga cagggacgcg cgcccagaca cggacatgcg cccggacacg 1921 gacacgcgcc cagacacgga catgcgcccg gacacggaca tgcgctgaag ccggccggag 1981 cggggcctgc atgggcgggt ctgtgggggg gcttggcctg atggtgggcg gggccccgcc 2041 cacagggccg accccaatac accagcgact caaccttgaa aaaaaaaaaa aaaaaaaaaa 2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //