LOCUS BC056606 3207 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens speedy homolog E3 (Xenopus laevis), mRNA (cDNA clone MGC:57359 IMAGE:4838469), complete cds. ACCESSION BC056606 VERSION BC056606.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3207) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3207) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (18-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 106 Row: g Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 51972277. FEATURES Location/Qualifiers source 1..3207 /db_xref="H-InvDB:HIT000259557" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:57359 IMAGE:4838469" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3207 /gene="SPDYE3" /db_xref="GeneID:441272" /db_xref="HGNC:HGNC:35462" CDS 186..1835 /gene="SPDYE3" /codon_start=1 /product="SPDYE3 protein" /protein_id="AAH56606.1" /db_xref="GeneID:441272" /db_xref="HGNC:HGNC:35462" /translation="MTSHQPQPQEEQSPQRSTSGYPLQEVVDDEVSGPSAPGVDPSPP RRSLGCKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYE AFNRLLAPGVDPSPPRRSLGCKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMK AKRRRVSLVLPEYYEAFNRLLAPGVDPSPPRRSLGCKRKRECLDESDDEPEKELAPEP EETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLAPGVDPSPPRRSLGCKRKRECL DESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEYYEAFNRLLAPGVDPS PPRRSLGCKRKRECLDESDDEPEKELAPEPEETWVAETLCGLKMKAKRRRVSLVLPEY YEAFNRLLEDPVIKRFLAWDKGLRVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALY LANDMEEDDEAPKQKIFYFLYGKTHSHIPLRPKHWFQLCRPMNPRARKNCSQIALFQK RRFQFFCSMRCRAWVSPEELEEIQAYDPEHWVWARDRAHLS" BASE COUNT 809 a 694 c 825 g 879 t ORIGIN 1 tctctgtcgg cgcctggcag ttcaggtgaa caacagtaac ttctcagagc tgttctccac 61 tcctgacttc tcccagcctc gagaattgat aacacactct tctggatccc agcagtgtcc 121 agaagaagac caaggacaga acagagacta gcttcggtga gattggacag attttgggaa 181 agatcatgac gagccatcaa ccgcagcccc aggaagagca gagcccccag cggagcacct 241 cagggtaccc cctccaggag gtggtggatg atgaagtgtc gggaccatca gcccctgggg 301 tagatcccag ccccccacgt aggtcccttg gctgcaaaag gaagagggag tgtttggatg 361 aatctgatga tgagccagag aaggagctcg cccctgagcc tgaggagacc tgggtggcgg 421 agacgctgtg tggcctcaag atgaaggcga agcgacggcg agtgtcgctc gtgctccctg 481 agtactacga ggccttcaac aggctgcttg cccctggggt agatcccagc cccccacgta 541 ggtcccttgg ctgcaaaagg aagagggagt gtttggatga atctgatgat gagccagaga 601 aggagctcgc ccctgagcct gaggagacct gggtggcgga gacgctgtgt ggcctcaaga 661 tgaaggcgaa gcgacggcga gtgtcgctcg tgctccctga gtactacgag gccttcaaca 721 ggctgcttgc ccctggggta gatcccagcc ccccacgtag gtcccttggc tgcaaaagga 781 agagggagtg tttggatgaa tctgatgatg agccagagaa ggagctcgcc cctgagcctg 841 aggagacctg ggtggcagag acgctgtgtg gcctcaagat gaaggcgaag cgacggcgag 901 tgtcgctcgt gctccctgag tactacgagg ccttcaacag gctgcttgcc cctggggtag 961 atcccagccc cccacgtagg tcccttggct gcaaaaggaa gagggagtgt ttggatgaat 1021 ctgatgatga gccagagaag gagctcgccc ctgagcctga ggagacctgg gtggcggaga 1081 cgctgtgtgg cctcaagatg aaggcgaagc gacggcgagt gtcgctcgtg ctccctgagt 1141 actacgaggc cttcaacagg ctgcttgccc ctggggtaga tcccagcccc ccacgtaggt 1201 cccttggctg caaaaggaag agggagtgtt tggatgaatc tgatgatgag ccagagaagg 1261 agctcgcccc tgagcctgag gagacctggg tggcggagac gctgtgtggc ctcaagatga 1321 aggcgaagcg acggcgagtg tcgctcgtgc tccctgagta ctacgaggcc ttcaacaggc 1381 tgcttgagga tcctgtcatt aaaagattcc tggcctggga caaaggtctg agggtgtcag 1441 acaagtatct cctggctatg gtcatagcgt atttcagccg ggccggcctc ccctcctggc 1501 aataccaacg cattcatttc ttcctggctc tctatctggc caatgacatg gaggaggacg 1561 acgaggcccc caaacaaaag atcttctact tcctgtacgg gaagacccac tctcacatac 1621 ccttgcgccc taagcattgg ttccagttat gccgtcccat gaacccgagg gccaggaaga 1681 actgctctca gatagccttg ttccagaagc gtcggttcca gttcttctgt tccatgcgct 1741 gcagggcttg ggtttccccg gaggagttgg aggagatcca ggcttatgac ccagagcact 1801 gggtgtgggc gcgagatcgc gcccaccttt cctagagctc cagggaccgt ggaggcctga 1861 ggtcatcggc ctgagagaag aacaccggac ccaggggaga tgtggatttt cagcaggaac 1921 tttattccag tgctaatggc agacatcagg aaggaggaga ggagccattt gtgcagatca 1981 tctagaagaa cctggaccat tcttgacaga gctgaataca gtgatcacgt tgtcctccaa 2041 ggagcagggg tggggtgggg tacttctagg agtccttgga gaaaagtaag aaaccaggag 2101 tgtttccagt tccacccttt cctgcggcac cacctccctt tttatattgc tgaatgccaa 2161 cctccctggg gcggaacctg gaggtcctgt ttcttacgga cttggttgcc acagtccagg 2221 agcatttgaa ggcacagtgc aggggctcag attggcacag aattctttgt gaaatatgag 2281 tgccacagac tgtaacagat agcttcatgc acactatgca ttttattggt ttgtttggaa 2341 aatgttggcc attgaatcat taataggttt atttcaaata gtttggaaat tgttgtactt 2401 ttgaaaacat gctgttcctg tagagttttt tgatgagagt tatagttgtt atatatacat 2461 aaagataatt ttcttttcat ttttaagtga gaattctttt tatcctaaat cttttattat 2521 ctttaaattt ttctctgtat tattatatgt gctcctgaag cgagcactct ttttatctat 2581 gatacttcca taataatctc ttctatttat agctattggt agttccccca aattctggtc 2641 atagaaattt ttatttgctg tttaggtttg tgactgaatt gtgagaattc agttgtgatt 2701 tttaacatgt cttagatata tatactaaca tgtctaatat atactatcta ttttattgat 2761 ttatttcgaa aaagatgggc aaagaattat ttaaatatta ttttatttat ttaaatattt 2821 attaaatata tttatttatt taaatattta ttaaatatat ttatttattt aaatgttatt 2881 actttaaata ttattttaaa tattttggaa atactggtat ttttgaatag atgctgtttc 2941 tataaagctg tgtgatgggt attataactg ttatatacac ataaatataa ttttgttttc 3001 ctttttaaga gaggattctt tttatcctaa atcttttacc tttcaatctt tgtatctatt 3061 actacatatg ctgctgaagg gagcagactt tttatctatg atacttagtt aatgtatata 3121 ttacatttat agctatgtgg tagttcccct aaattcttgt aaaaataaat ttttatttga 3181 tatttaaaaa aaaaaaaaaa aaaaaaa //