LOCUS       BC056418                2706 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens melanoma cell adhesion molecule, mRNA (cDNA clone
            MGC:65073 IMAGE:6195486), complete cds.
ACCESSION   BC056418
VERSION     BC056418.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2706)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2706)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (14-AUG-2003) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Dr. James R. Lupski
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 119 Row: o Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 5729917.
FEATURES             Location/Qualifiers
     source          1..2706
                     /db_xref="H-InvDB:HIT000054169"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:65073 IMAGE:6195486"
                     /tissue_type="Peripheral Nervous System, sympathetic
                     trunk"
                     /clone_lib="Lupski_sympathetic_trunk"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..2706
                     /gene="MCAM"
                     /gene_synonym="CD146"
                     /gene_synonym="MUC18"
                     /db_xref="GeneID:4162"
                     /db_xref="HGNC:HGNC:6934"
                     /db_xref="MIM:155735"
     CDS             20..1960
                     /gene="MCAM"
                     /gene_synonym="CD146"
                     /gene_synonym="MUC18"
                     /codon_start=1
                     /product="melanoma cell adhesion molecule"
                     /protein_id="AAH56418.1"
                     /db_xref="GeneID:4162"
                     /db_xref="HGNC:HGNC:6934"
                     /db_xref="MIM:155735"
                     /translation="MGLPRLVCAFLLAACCCCPRVAGVPGEAEQPAPELVEVEVGSTA
                     LLKCGLSQSQGNLSHVDWFSVHKEKRTLIFRVRQGQGQSEPGEYEQRLSLQDRGATLA
                     LTQVTPQDERIFLCQGKRPRSQEYRIQLRVYKAPEEPNIQVNPLGIPVNSKEPEEVAT
                     CVGRNGYPIPQVIWYKNGRPLKEEKNRVHIQSSQTVESSGLYTLQSILKAQLVKEDKD
                     AQFYCELNYRLPSGNHMKESREVTVPVFYPTEKVWLEVEPVGMLKEGDRVEIRCLADG
                     NPPPHFSISKQNPSTREAEEETTNDNGVLVLEPARKEHSGRYECQGLDLDTMISLLSE
                     PQELLVNYVSDVRVSPAAPERQEGSSLTLTCEAESSQDLEFQWLREETGQVLERGPVL
                     QLHDLKREAGGGYRCVASVPSIPGLNRTQLVNVAIFGPPWMAFKERKVWVKENMVLNL
                     SCEASGHPRPTISWNVNGTASEQDQDPQRVLSTLNVLVTPELLETGVECTASNDLGKN
                     TSILFLELVNLTTLTPDSNTTTGLSTSTASPHTRANSTSTERKLPEPESRGVVIVAVI
                     VCILVLAVLGAVLYFLYKKGKLPCRRSGKQEITLPPSRKSELVVEVKSDKLPEEMGLL
                     QGSSGDKRAPGDQGEKYIDLRH"
BASE COUNT          616 a          801 c          780 g          509 t
ORIGIN      
        1 cgccctccgg ccgggaagca tggggcttcc caggctggtc tgcgccttct tgctcgccgc
       61 ctgctgctgc tgtcctcgcg tcgcgggtgt gcccggagag gctgagcagc ctgcgcctga
      121 gctggtggag gtggaagtgg gcagcacagc ccttctgaag tgcggcctct cccagtccca
      181 aggcaacctc agccatgtcg actggttttc tgtccacaag gagaagcgga cgctcatctt
      241 ccgtgtgcgc cagggccagg gccagagcga acctggggag tacgagcagc ggctcagcct
      301 ccaggacaga ggggctactc tggccctgac tcaagtcacc ccccaagacg agcgcatctt
      361 cttgtgccag ggcaagcgcc ctcggtccca ggagtaccgc atccagctcc gcgtctacaa
      421 agctccggag gagccaaaca tccaggtcaa ccccctgggc atccctgtga acagtaagga
      481 gcctgaggag gtcgctacct gtgtagggag gaacgggtac cccattcctc aagtcatctg
      541 gtacaagaat ggccggcctc tgaaggagga gaagaaccgg gtccacattc agtcgtccca
      601 gactgtggag tcgagtggtt tgtacacctt gcagagtatt ctgaaggcac agctggttaa
      661 agaagacaaa gatgcccagt tttactgtga gctcaactac cggctgccca gtgggaacca
      721 catgaaggag tccagggaag tcaccgtccc tgttttctac ccgacagaaa aagtgtggct
      781 ggaagtggag cccgtgggaa tgctgaagga aggggaccgc gtggaaatca ggtgtttggc
      841 tgatggcaac cctccaccac acttcagcat cagcaagcag aaccccagca ccagggaggc
      901 agaggaagag acaaccaacg acaacggggt cctggtgctg gagcctgccc ggaaggaaca
      961 cagtgggcgc tatgaatgtc agggcctgga cttggacacc atgatatcgc tgctgagtga
     1021 accacaggaa ctactggtga actatgtgtc tgacgtccga gtgagtcccg cagcccctga
     1081 gagacaggaa ggcagcagcc tcaccctgac ctgtgaggca gagagtagcc aggacctcga
     1141 gttccagtgg ctgagagaag agacaggcca ggtgctggaa agggggcctg tgcttcagtt
     1201 gcatgacctg aaacgggagg caggaggcgg ctatcgctgc gtggcgtctg tgcccagcat
     1261 acccggcctg aaccgcacac agctggtcaa cgtggccatt tttggccccc cttggatggc
     1321 attcaaggag aggaaggtgt gggtgaaaga gaatatggtg ttgaatctgt cttgtgaagc
     1381 gtcagggcac ccccggccca ccatctcctg gaacgtcaac ggcacggcaa gtgaacaaga
     1441 ccaagatcca cagcgagtcc tgagcaccct gaatgtcctc gtgaccccgg agctgttgga
     1501 gacaggtgtt gaatgcacgg cctccaacga cctgggcaaa aacaccagca tcctcttcct
     1561 ggagctggtc aatttaacca ccctcacacc agactccaac acaaccactg gcctcagcac
     1621 ttccactgcc agtcctcata ccagagccaa cagcacctcc acagagagaa agctgccgga
     1681 gccggagagc cggggcgtgg tcatcgtggc tgtgattgtg tgcatcctgg tcctggcggt
     1741 gctgggcgct gtcctctatt tcctctataa gaagggcaag ctgccgtgca ggcgctcagg
     1801 gaagcaggag atcacgctgc ccccgtctcg taagagcgaa cttgtagttg aagttaagtc
     1861 agataagctc ccagaagaga tgggcctcct gcagggcagc agcggtgaca agagggctcc
     1921 gggagaccag ggagagaaat acatcgatct gaggcattag ccccgaatca cttcagctcc
     1981 cttccctgcc tggaccattc ccagctccct gctcactctt ctctcagcca aagcctccaa
     2041 agggactaga gagaagcctc ctgctcccct cgcctgcaca ccccctttca gagggccact
     2101 gggttaggac ctgaggacct cacttggccc tgcaaggccc gcttttcagg gaccagtcca
     2161 ccaccatctc ctccacgttg agtgaagctc atcccaagca aggagcccca gtctcccgag
     2221 cgggtaggag agtttcttgc agaacgtgtt ttttctttac acacattatg gctgtaaata
     2281 cctggctcct gccagcagct gagctgggta gcctctctga gctggtttcc tgccccaaag
     2341 gctggcttcc accatccagg tgcaccactg aagtgaggac acaccggagc caggcgcctg
     2401 ctcatgttga agtgcgctgt tcacacccgc tccggagagc accccagcag catccagaag
     2461 cagctgcagt gttgctgcca ccaccctcct gtctgcctct tcaaagtctc ctgtgacatt
     2521 ttttctttgg tcagaagcca ggaactggtg tcattcctta aaagatacgt gccggggcca
     2581 ggtgtggtgg ctcacgcctg taatcccagc actttgggag gccgaggcgg gcggatcaca
     2641 aagtcaggac gagaccatcc tggctaacac ggtgaaaccc tgtctctact aaaaaaaaaa
     2701 aaaaaa
//