LOCUS BC056416 860 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 20 open reading frame 149, mRNA (cDNA clone
MGC:64958 IMAGE:6138381), complete cds.
ACCESSION BC056416
VERSION BC056416.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 860)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 860)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: k Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147371.
FEATURES Location/Qualifiers
source 1..860
/db_xref="H-InvDB:HIT000054168"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:64958 IMAGE:6138381"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..860
/gene="C20orf149"
/gene_synonym="dJ697K14.9"
/gene_synonym="FLJ21046"
/gene_synonym="MGC2479"
/db_xref="GeneID:79144"
/db_xref="HGNC:HGNC:16142"
CDS 195..539
/gene="C20orf149"
/gene_synonym="dJ697K14.9"
/gene_synonym="FLJ21046"
/gene_synonym="MGC2479"
/codon_start=1
/product="chromosome 20 open reading frame 149"
/protein_id="AAH56416.1"
/db_xref="GeneID:79144"
/db_xref="HGNC:HGNC:16142"
/translation="MAAIPSSGSLVATHDYYRRRLGSTSSNSSCSSTECPGEAIPHPP
GLPKADPGHWWASFFFGKSTLPFMATVLESAEHSEPPQASSSMTACGLARDAPRKQPG
GQSSTASAGPPS"
BASE COUNT 176 a 346 c 218 g 120 t
ORIGIN
1 atcgtcgacc cacgcgtccg cccacgcgtc cgcggacgcg tgggcggacg cgtgggctgt
61 cgtggcgcgg cttcccgcgg tcttctctgc aaatgggctc cgtggcctag cgcccccgtc
121 cccgccaccc gtgatcgtgc gccgaggccc gcgaggggtc gccgcccaga tcccaccagc
181 cagcaagcta aagcatggcg gccatcccct ccagcggctc gctcgtggcc acccacgact
241 actaccggcg ccgcctgggt tccacttcca gcaacagctc ctgcagcagt accgagtgcc
301 ccggggaagc cattccccac cccccaggtc tccccaaggc tgacccgggt cattggtggg
361 ccagcttctt tttcgggaag tccaccctcc cgttcatggc cacggtgttg gagtccgcag
421 agcactcgga acctccccag gcctccagca gcatgaccgc ctgtggcctg gctcgggacg
481 ccccgaggaa gcagcccggc ggtcagtcca gcacagccag cgctgggccc ccgtcctgac
541 ctgagcggtt accaccagcc ccaggcctgc ggaggcgcta gtccaccaga gcccctcccc
601 gcccctctcc ccactccgca tccctcgccc ccctccccac ctcccacccc ccaccctgta
661 aactaggcgg ctgcagcaag cagaccttcg catcaacaca gcagacacca aaaaccagtg
721 agagccccgc tctctaccgc ccggccccag cactcgctag ctttcctgac acctggaact
781 gtgcacctgg caccaagcgg aaaataaact ccaagcagcc agtagcaaaa aaaaaaaaaa
841 aaaaaaaaaa aaaaaaaaaa
//