LOCUS BC056402 2004 bp mRNA linear HUM 29-JUL-2008 DEFINITION Homo sapiens chromosome 11 open reading frame 84, mRNA (cDNA clone MGC:50858 IMAGE:5764461), complete cds. ACCESSION BC056402 VERSION BC056402.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2004) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2004) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (14-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 89 Row: i Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39930522. FEATURES Location/Qualifiers source 1..2004 /db_xref="H-InvDB:HIT000054160" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:50858 IMAGE:5764461" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2004 /gene="C11orf84" /db_xref="GeneID:144097" /db_xref="HGNC:HGNC:25115" CDS 237..1382 /gene="C11orf84" /codon_start=1 /product="chromosome 11 open reading frame 84" /protein_id="AAH56402.1" /db_xref="GeneID:144097" /db_xref="HGNC:HGNC:25115" /translation="MALKAEGAALDCFEVTLKCEEGEDEEEAMVVAVIPRPEPMLRVT QQEKTPPPRPSPLEAGSDGCEEPKQQVSWEQEFLVGSSPGGSGRALCMVCGAEIRAPS ADTARSHILEQHPHTLDLSPSEKSNILEAWSEGVALLQDVRAEQPSPPNSDSGQDAHP DPDANPDAARMPAEIVVLLDSEDNPSLPKRSRPRGLRPLELPAVPATEPGNKKPRGQR WKEPPGEEPVRKKRGRPMTKNLDPDPEPPSPDSPTETFAAPAEVRHFTDGSFPAGFVL QLFSHTQLRGPDSKDSPKDREVAEGGLPRAESPSPAPPPGLRGTLDLQVIRVRMEEPP AVSLLQDWSRHPQGTKRVGAGDTSDWPTVLSESSTTVAGKPEKGNGV" BASE COUNT 433 a 639 c 607 g 325 t ORIGIN 1 gccccggatt gagccctccc cgcccgggct cccgacgcgc cgaggtctcg gggaggcccg 61 gacgcgccgg tcgcaggccc ggccggcgag cggcgggcgg gcggcgggga gggggctgcg 121 cggggcgggc ggcgggcccg gcgctattcc ggccaggagg cgggaggcgg ttgccggctg 181 cgcgccgaag cctgcgcgcc agtcctccgg ccactgctat cgcccacggc cgcaccatgg 241 ccctaaaggc cgagggcgcc gcactcgact gcttcgaggt gacgctgaaa tgcgaggaag 301 gggaggacga ggaggaggcc atggtggtgg ccgtaattcc gcggcccgag ccgatgctca 361 gagtgaccca acaggagaag accccaccgc ctagacccag cccgctagag gcaggcagtg 421 atggctgtga ggagccgaag cagcaggtgt cttgggagca ggagttcctg gtgggcagca 481 gcccaggagg cagcgggcgg gcactgtgca tggtgtgtgg cgctgagatc cgggcaccct 541 cggccgacac agctcgctcg cacatcttgg agcagcaccc tcacaccttg gacctgagcc 601 cttctgagaa gagcaatatc ctggaggcct ggagtgaagg ggtggccctc ttgcaagacg 661 tgagagctga gcagccgtcc ccacccaact cagactcggg ccaggatgcc cacccagacc 721 cagacgccaa cccagacgct gccagaatgc cagccgaaat cgtcgttctc cttgactctg 781 aggataaccc atccctccct aaaaggagca ggcccagggg actccgcccc ctcgagcttc 841 ctgctgtccc tgccacagag ccaggaaata agaagccccg tggtcagaga tggaaggaac 901 ccccagggga agagccagtc agaaagaaaa gaggcagacc tatgaccaaa aacctggacc 961 ctgacccaga gcccccatcg ccagactcgc ccacggagac tttcgcagca ccagccgagg 1021 tccgacactt cactgacggc agcttccccg ccggcttcgt cttgcagctc ttctcccaca 1081 cccagctcag gggcccagac agcaaggact cacccaaaga cagggaagtg gcagaaggag 1141 gccttccccg ggcggagagc ccctctccag ctccccctcc ggggctccgc gggacactgg 1201 atctccaggt tatccgcgtg cggatggagg agcccccagc ggtcagcctc ctgcaagact 1261 ggtccaggca cccccagggc accaagcgtg tgggagcagg tgacacctca gactggccca 1321 cagttctgtc agaatccagc accactgtgg cagggaagcc ggaaaaaggg aatggagtgt 1381 aaattcttgc tttcctgggg agggagggag ggatgaggca gcgtccccca gtggcttata 1441 actcagagct gcctggctca cccacctggt ggagagagta gaaacaggtg ccagggcagg 1501 agggggctgg ggcagcatcc actgttattt cggggcactg gaaagtgtct gttcctggcc 1561 aggcctgagg tcggcgaggg tggctgaggc tgttgtgcag tagggcactg ggcctgtgga 1621 gaacacctac cccagtcctt cgctgacccc cacctctgtt tgtcccccat gacctcctcc 1681 caccctcccc ctgctcccca ccattctccc ttggcacagt gccttacaca agagtggtca 1741 taagggggtt tgaactgagt cccactacct cgggggacac ctctcctccc cacttgttca 1801 ggcttctaaa ccaggaggcc tccattacct cttcctgtcc caaccctgca gaggcctgaa 1861 gctgggcctg ggcaccccat tcactcccgt tctcatttac atctgttttc ctgttgtata 1921 tatcaccttt gttgacaata aattattttt ttttattaag aaaaaaaaaa aaaaaaaaaa 1981 aaaaaaaaaa aaaaaaaaaa aaaa //