LOCUS BC056268 535 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens adenomatous polyposis coli, mRNA (cDNA clone
IMAGE:6744334), partial cds.
ACCESSION BC056268
VERSION BC056268.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 48 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 53759121.
FEATURES Location/Qualifiers
source 1..535
/db_xref="H-InvDB:HIT000259546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6744334"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_141"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>535
/gene="APC"
/gene_synonym="BTPS2"
/gene_synonym="DP2"
/gene_synonym="DP2.5"
/gene_synonym="DP3"
/gene_synonym="GS"
/db_xref="GeneID:324"
/db_xref="HGNC:HGNC:583"
/db_xref="MIM:611731"
CDS 57..>535
/gene="APC"
/gene_synonym="BTPS2"
/gene_synonym="DP2"
/gene_synonym="DP2.5"
/gene_synonym="DP3"
/gene_synonym="GS"
/codon_start=1
/product="APC protein"
/protein_id="AAH56268.1"
/db_xref="GeneID:324"
/db_xref="HGNC:HGNC:583"
/db_xref="MIM:611731"
/translation="MAAASYDQLLKQVEALKMENSNLRQELEDNSNHLTKLETEASNM
KEVLKQLQGSIEDEAMASSGQIDLLERLKELNLDSSNFPGVKLRSKMSLRSYGSREGS
VSSRSGECSPVPMGSFPRRGFVNGSRESTGYLEELEKERSLLLADLDKEKKKKKKKK"
BASE COUNT 189 a 83 c 134 g 129 t
ORIGIN
1 ggggacagaa tggaggtgct gccggactcg gaaatggggt ccaagggtag ccaaggatgg
61 ctgcagcttc atatgatcag ttgttaaagc aagttgaggc actgaagatg gagaactcaa
121 atcttcgaca agagctagaa gataattcca atcatcttac aaaactggaa actgaggcat
181 ctaatatgaa ggaagtactt aaacaactac aaggaagtat tgaagatgaa gctatggctt
241 cttctggaca gattgattta ttagagcgtc ttaaagagct taacttagat agcagtaatt
301 tccctggagt aaaactgcgg tcaaaaatgt ccctccgttc ttatggaagc cgggaaggat
361 ctgtatcaag ccgttctgga gagtgcagtc ctgttcctat gggttcattt ccaagaagag
421 ggtttgtaaa tggaagcaga gaaagtactg gatatttaga agaacttgag aaagagaggt
481 cattgcttct tgctgatctt gacaaggaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//